RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 CALCOCO1Q9P1Z2 691 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 DEC1Q9P2X7 70 aa12.38□□□□□ -0.43
SRSF4-204ENST00000489898 PCNX2A6NKB5 2137 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 TCRBV21S2A2A0A5A6 115 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 DCDC2BA2VCK2 349 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 C10orf142B7Z368 130 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 WASH3PC4AMC7 463 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 CCDC192P0DO97 292 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 SLC6A4P31645 630 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 IL12RB1P42701 662 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 GPD2P43304 727 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 RGS7P49802 495 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 UBE2HP62256 183 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 PITX1P78337 314 aaPredicted RBP12.37□□□□□ -0.43
SRSF4-204ENST00000489898 ANO4Q32M45 955 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 DPCR1Q3MIW9 517 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 MIIPQ5JXC2 388 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 OTUD1Q5VV17 481 aaPredicted RBP12.37□□□□□ -0.43
SRSF4-204ENST00000489898 GRAMD4Q6IC98 578 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 TRIM65Q6PJ69 517 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 CLEC17AQ6ZS10 378 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 CEP68Q76N32 757 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 PPM1KQ8N3J5 372 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 TRIML1Q8N9V2 468 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 KCNV2Q8TDN2 545 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 EDEM1Q92611 657 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 BHMTQ93088 406 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 MYO19Q96H55 970 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 RTKNQ9BST9 563 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 GTPBP4Q9BZE4 634 aaKnown RBP12.37□□□□□ -0.43
SRSF4-204ENST00000489898 CNGB3Q9NQW8 809 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 TMEM74BQ9NUR3 256 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 CACNA2D2Q9NY47 1150 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 SFMBT1Q9UHJ3 866 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 RAB23Q9ULC3 237 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 RAD54BQ9Y620 910 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 PLXNB3Q9ULL4 1909 aa12.37□□□□□ -0.43
SRSF4-204ENST00000489898 IGHV1OR15-9A0A0B4J2B8 117 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 PIK3R2O00459 728 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 CDX4O14627 284 aaPredicted RBP12.36□□□□□ -0.43
SRSF4-204ENST00000489898 AFPP02771 609 aaKnown RBP12.36□□□□□ -0.43
SRSF4-204ENST00000489898 HMBSP08397 361 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 HOXB2P14652 356 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 CD19P15391 556 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 PRKCHP24723 683 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 HLA-FP30511 346 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 PPP1R2P41236 205 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 WASP42768 502 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 DGKGP49619 791 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 COPAP53621 1224 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 CNGA2Q16280 664 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 MEA1Q16626 185 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 CCDC40Q4G0X9 1142 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 BSPRYQ5W0U4 402 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 DENND1BQ6P3S1 775 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 DENND1CQ8IV53 801 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 FMNL3Q8IVF7 1028 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 SLC41A1Q8IVJ1 513 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 WDTC1Q8N5D0 677 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.36□□□□□ -0.43
SRSF4-204ENST00000489898 CCDC150Q8NCX0 1101 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 EHBP1Q8NDI1 1231 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 SHC3Q92529 594 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 PLD4Q96BZ4 506 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 SLC39A13Q96H72 371 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 CCDC34Q96HJ3 373 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 FCRL2Q96LA5 508 aaPredicted RBP12.36□□□□□ -0.43
SRSF4-204ENST00000489898 SRRTQ9BXP5 876 aaKnown RBP12.36□□□□□ -0.43
SRSF4-204ENST00000489898 RWDD2AQ9UIY3 292 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 CDV3Q9UKY7 258 aaKnown RBP12.36□□□□□ -0.43
SRSF4-204ENST00000489898 WASF3Q9UPY6 502 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 ATXN2Q99700 1313 aaKnown RBP12.36□□□□□ -0.43
SRSF4-204ENST00000489898 CACNA1BQ00975 2339 aa12.36□□□□□ -0.43
SRSF4-204ENST00000489898 SMG1Q96Q15 3661 aaKnown RBP12.35□□□□□ -0.43
SRSF4-204ENST00000489898 SLC12A8A0AV02 714 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 GOLGA6L4A6NEF3 574 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 M0QYV0 167 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 PAPSS1O43252 624 aaPredicted RBP12.35□□□□□ -0.43
SRSF4-204ENST00000489898 ADRB1P08588 477 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 PNMA6AP0CW24 399 aaPredicted RBP12.35□□□□□ -0.43
SRSF4-204ENST00000489898 SLC9A1P19634 815 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 NTSR1P30989 418 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 CAMK4Q16566 473 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 PTPRNQ16849 979 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 EOGTQ5NDL2 527 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 DQX1Q8TE96 717 aaKnown RBP12.35□□□□□ -0.43
SRSF4-204ENST00000489898 IPO4Q8TEX9 1081 aaKnown RBP12.35□□□□□ -0.43
SRSF4-204ENST00000489898 HMGB4Q8WW32 186 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 EXOC4Q96A65 974 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 MRGPRX1Q96LB2 322 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 SLC4A5Q9BY07 1137 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 MKRN2Q9H000 416 aaKnown RBP12.35□□□□□ -0.43
SRSF4-204ENST00000489898 NACA2Q9H009 215 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 CLSTN2Q9H4D0 955 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 USP36Q9P275 1121 aaKnown RBP12.35□□□□□ -0.43
SRSF4-204ENST00000489898 THAP10Q9P2Z0 257 aaPredicted RBP12.35□□□□□ -0.43
SRSF4-204ENST00000489898 LSM7Q9UK45 103 aaKnown RBP12.35□□□□□ -0.43
SRSF4-204ENST00000489898 PCDHB4Q9Y5E5 795 aa12.35□□□□□ -0.43
SRSF4-204ENST00000489898 COL27A1Q8IZC6 1860 aaPredicted RBP12.35□□□□□ -0.43
SRSF4-204ENST00000489898 BICDL2A1A5D9 508 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms