RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 CCDC149Q6ZUS6 474 aa22.47■■□□□ 1.19
SMC4-221ENST00000489573 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.47■■□□□ 1.19
SMC4-221ENST00000489573 HDAC7Q8WUI4 952 aa22.47■■□□□ 1.19
SMC4-221ENST00000489573 PNKPQ96T60 521 aa22.47■■□□□ 1.19
SMC4-221ENST00000489573 TMPRSS4Q9NRS4 437 aa22.47■■□□□ 1.19
SMC4-221ENST00000489573 RCOR3Q9P2K3 495 aaPredicted RBP22.47■■□□□ 1.19
SMC4-221ENST00000489573 PCYOX1Q9UHG3 505 aa22.47■■□□□ 1.19
SMC4-221ENST00000489573 ZNF638Q14966 1978 aaKnown RBP22.47■■□□□ 1.19
SMC4-221ENST00000489573 MSI1O43347 362 aaKnown RBP22.46■■□□□ 1.19
SMC4-221ENST00000489573 GLUD1P00367 558 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 SPATA31D3P0C874 917 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 ARL4AP40617 200 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 SLC7A5Q01650 507 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 DR1Q01658 176 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 SPATA31D4Q6ZUB0 917 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 PYROXD2Q8N2H3 581 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 TTC13Q8NBP0 860 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 MICAL1Q8TDZ2 1067 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 RUBCNQ92622 972 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 ZNF512Q96ME7 567 aaPredicted RBP22.46■■□□□ 1.19
SMC4-221ENST00000489573 CDK5RAP1Q96SZ6 601 aaKnown RBP22.46■■□□□ 1.19
SMC4-221ENST00000489573 GDF15Q99988 308 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 MAGEB5Q9BZ81 275 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 TKTL2Q9H0I9 626 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 ANLNQ9NQW6 1124 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 STIM2Q9P246 746 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 DMGDHQ9UI17 866 aaKnown RBP22.46■■□□□ 1.19
SMC4-221ENST00000489573 TUBBP07437 444 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 CCR1P32246 355 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 EFEMP1Q12805 493 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 NNTQ13423 1086 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 SNX1Q13596 522 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 C10orf120Q5SQS8 335 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 SNX30Q5VWJ9 437 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 ITIH5Q86UX2 942 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 CCDC105Q8IYK2 499 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 KREMEN2Q8NCW0 462 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 PSMG2Q969U7 264 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 CSPG4P5Q96PW8 444 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 ARHGEF38Q9NXL2 777 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 UXTQ9UBK9 157 aaPredicted RBP22.46■■□□□ 1.19
SMC4-221ENST00000489573 TLR6Q9Y2C9 796 aa22.46■■□□□ 1.19
SMC4-221ENST00000489573 GBF1Q92538 1859 aa22.45■■□□□ 1.19
SMC4-221ENST00000489573 H3BRJ5 948 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 I6L893 689 aaPredicted RBP22.45■■□□□ 1.18
SMC4-221ENST00000489573 APOC4-APOC2K7ER74 178 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 TTI1O43156 1089 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 HEXIM1O94992 359 aaKnown RBP22.45■■□□□ 1.18
SMC4-221ENST00000489573 APOC2P02655 101 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 CAMK1Q14012 370 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 PPP2R5DQ14738 602 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 DNAJB7Q7Z6W7 309 aaPredicted RBP22.45■■□□□ 1.18
SMC4-221ENST00000489573 TADA2BQ86TJ2 420 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 ZNF276Q8N554 614 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 PCDH19Q8TAB3 1148 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 HAUS1Q96CS2 278 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 FRMD8P1Q9BZ68 369 aaPredicted RBP22.45■■□□□ 1.18
SMC4-221ENST00000489573 PLEKHA4Q9H4M7 779 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 TRPM5Q9NZQ8 1165 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 CWC15Q9P013 229 aaKnown RBP22.45■■□□□ 1.18
SMC4-221ENST00000489573 RASAL2Q9UJF2 1139 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 RAB21Q9UL25 225 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 ASB3Q9Y575 518 aa22.45■■□□□ 1.18
SMC4-221ENST00000489573 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.44■■□□□ 1.18
SMC4-221ENST00000489573 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.44■■□□□ 1.18
SMC4-221ENST00000489573 FAM187AA6NFU0 413 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 APOL1O14791 398 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 TLR5O60602 858 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 LRG1P02750 347 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 C8AP07357 584 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 MCM3P25205 808 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 IRS1P35568 1242 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 PBX2P40425 430 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 PPP3CCP48454 512 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 GPM6BQ13491 265 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 SLC9A4Q6AI14 798 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 WDR93Q6P2C0 686 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 DRICH1Q6PGQ1 229 aaPredicted RBP22.44■■□□□ 1.18
SMC4-221ENST00000489573 PQLC3Q8N755 202 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 ANKRD7Q92527 254 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 FAM118BQ9BPY3 351 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 PBX4Q9BYU1 374 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 CCSER2Q9H7U1 834 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 MARCH2Q9P0N8 246 aa22.44■■□□□ 1.18
SMC4-221ENST00000489573 ZNF840PA6NDX5 716 aa22.43■■□□□ 1.18
SMC4-221ENST00000489573 H3BNC9 293 aa22.43■■□□□ 1.18
SMC4-221ENST00000489573 LIASO43766 372 aa22.43■■□□□ 1.18
SMC4-221ENST00000489573 ZFXP17010 805 aaPredicted RBP22.43■■□□□ 1.18
SMC4-221ENST00000489573 GOT1P17174 413 aa22.43■■□□□ 1.18
SMC4-221ENST00000489573 TGM2P21980 687 aa22.43■■□□□ 1.18
SMC4-221ENST00000489573 PTGIRP43119 386 aa22.43■■□□□ 1.18
SMC4-221ENST00000489573 KCNJ1P48048 391 aa22.43■■□□□ 1.18
SMC4-221ENST00000489573 ZNF135P52742 658 aaPredicted RBP22.43■■□□□ 1.18
SMC4-221ENST00000489573 TBX4P57082 545 aa22.43■■□□□ 1.18
SMC4-221ENST00000489573 SEMA3BQ13214 749 aa22.43■■□□□ 1.18
SMC4-221ENST00000489573 TRIP4Q15650 581 aaPredicted RBP22.43■■□□□ 1.18
SMC4-221ENST00000489573 PDE12Q6L8Q7 609 aaKnown RBP22.43■■□□□ 1.18
SMC4-221ENST00000489573 JAMLQ86YT9 394 aa22.43■■□□□ 1.18
SMC4-221ENST00000489573 ACTL9Q8TC94 416 aa22.43■■□□□ 1.18
SMC4-221ENST00000489573 GRK7Q8WTQ7 553 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms