RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 PMS1P54277 932 aaKnown RBP12.34□□□□□ -0.43
ACTN4-206ENST00000489451 EFEMP1Q12805 493 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 ADAM9Q13443 819 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 BYSLQ13895 437 aaKnown RBP12.34□□□□□ -0.43
ACTN4-206ENST00000489451 DUOXA1Q1HG43 343 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 FUT11Q495W5 492 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 PREPLQ4J6C6 727 aaPredicted RBP12.34□□□□□ -0.43
ACTN4-206ENST00000489451 ARHGAP17Q68EM7 881 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 KRT39Q6A163 491 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 PIGZQ86VD9 579 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 FAM217AQ8IXS0 508 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 ZC3H3Q8IXZ2 948 aaKnown RBP12.34□□□□□ -0.43
ACTN4-206ENST00000489451 TRIML1Q8N9V2 468 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 ZNF419Q96HQ0 510 aaPredicted RBP12.34□□□□□ -0.43
ACTN4-206ENST00000489451 PIWIL1Q96J94 861 aaKnown RBP12.34□□□□□ -0.43
ACTN4-206ENST00000489451 IMPG2Q9BZV3 1241 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 MKRN2Q9H000 416 aaKnown RBP12.34□□□□□ -0.43
ACTN4-206ENST00000489451 GDPD2Q9HCC8 539 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 CISHQ9NSE2 258 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 USP36Q9P275 1121 aaKnown RBP12.34□□□□□ -0.43
ACTN4-206ENST00000489451 SLC6A14Q9UN76 642 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 SLC27A6Q9Y2P4 619 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 STON1Q9Y6Q2 735 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 SMG1Q96Q15 3661 aaKnown RBP12.33□□□□□ -0.44
ACTN4-206ENST00000489451 A0A1W2PQ27 194 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 A0A1W2PQ64 194 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 A0A1W2PQD8 194 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 GFRA2O00451 464 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 HYAL3O43820 417 aaPredicted RBP12.33□□□□□ -0.44
ACTN4-206ENST00000489451 GABBR2O75899 941 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 ZNF202O95125 648 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 KIF20AO95235 890 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 HMBSP08397 361 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 SERPINF2P08697 491 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 KRT13P13646 458 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 PRKCHP24723 683 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 MAOBP27338 520 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 GTF2H1P32780 548 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 PSEN1P49768 467 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 MXI1P50539 228 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 NUCB2P80303 420 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 GOLGA8FQ08AF8 430 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 GOLGA8DPQ0D2H9 430 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 EDRF1Q3B7T1 1238 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 SLC36A4Q6YBV0 504 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 MINDY1Q8N5J2 469 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 UBR7Q8N806 425 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 SORCS1Q8WY21 1168 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 TMEM176AQ96HP8 235 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 GTPBP2Q9BX10 602 aaKnown RBP12.33□□□□□ -0.44
ACTN4-206ENST00000489451 RAB20Q9NX57 234 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 THAP10Q9P2Z0 257 aaPredicted RBP12.33□□□□□ -0.44
ACTN4-206ENST00000489451 KLK13Q9UKR3 277 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 GPSM3Q9Y4H4 160 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 IGSF10Q6WRI0 2623 aa12.33□□□□□ -0.44
ACTN4-206ENST00000489451 NUMA1Q14980 2115 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 ARHGAP33O14559 1287 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 ZNF217O75362 1048 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 PRCPP42785 496 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 COPAP53621 1224 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 PNOCQ13519 176 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 COL28A1Q2UY09 1125 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 PM20D1Q6GTS8 502 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 NUDT18Q6ZVK8 323 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 DENND1CQ8IV53 801 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 FBXL13Q8NEE6 735 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 CEP76Q8TAP6 659 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 CCDC34Q96HJ3 373 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 FAXDC2Q96IV6 333 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 HEXIM2Q96MH2 286 aaKnown RBP12.32□□□□□ -0.44
ACTN4-206ENST00000489451 CAMK1GQ96NX5 476 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 BBC3Q96PG8 261 aaPredicted RBP12.32□□□□□ -0.44
ACTN4-206ENST00000489451 ULBP1Q9BZM6 244 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 UBXN6Q9BZV1 441 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 DNAAF2Q9NVR5 837 aaKnown RBP12.32□□□□□ -0.44
ACTN4-206ENST00000489451 WSB2Q9NYS7 404 aaPredicted RBP12.32□□□□□ -0.44
ACTN4-206ENST00000489451 MARCH2Q9P0N8 246 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 COQ4Q9Y3A0 265 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 SLCO1B1Q9Y6L6 691 aa12.32□□□□□ -0.44
ACTN4-206ENST00000489451 PLXNB3Q9ULL4 1909 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 SLC12A8A0AV02 714 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 RALAP11233 206 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 RPL13P26373 211 aaKnown RBP12.31□□□□□ -0.44
ACTN4-206ENST00000489451 HOXD9P28356 352 aaPredicted RBP12.31□□□□□ -0.44
ACTN4-206ENST00000489451 DPP6P42658 865 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 SGSHP51688 502 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 TKTL1P51854 596 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 YWHAGP61981 247 aaKnown RBP eCLIP12.31□□□□□ -0.44
ACTN4-206ENST00000489451 BNC1Q01954 994 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 GFPT1Q06210 699 aaPredicted RBP12.31□□□□□ -0.44
ACTN4-206ENST00000489451 PDE4CQ08493 712 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 ZNF234Q14588 700 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 TRIP4Q15650 581 aaPredicted RBP12.31□□□□□ -0.44
ACTN4-206ENST00000489451 GOLGA7BQ2TAP0 167 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 PKDCCQ504Y2 493 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 KIAA1324Q6UXG2 1013 aaKnown RBP12.31□□□□□ -0.44
ACTN4-206ENST00000489451 METTL3Q86U44 580 aaKnown RBP12.31□□□□□ -0.44
ACTN4-206ENST00000489451 CPXM2Q8N436 756 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 ANKRD52Q8NB46 1076 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 ERCC4Q92889 916 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms