RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 MBD4O95243 580 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 NTSR2O95665 410 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 IGLV2-14P01704 120 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 GOLGA6DP0CG33 693 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 CCDC192P0DO97 292 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 VCAM1P19320 739 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 PDIA3P30101 505 aaKnown RBP3.22□□□□□ -1.89
CALD1-221ENST00000489019 GRIA3P42263 894 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 METAP2P50579 478 aaKnown RBP eCLIP3.22□□□□□ -1.89
CALD1-221ENST00000489019 SOX8P57073 446 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 TUBB3Q13509 450 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 ZRSR1Q15695 479 aaKnown RBP3.22□□□□□ -1.89
CALD1-221ENST00000489019 CAMK4Q16566 473 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 CCDC157Q569K6 752 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 RBM20Q5T481 1227 aaKnown RBP3.22□□□□□ -1.89
CALD1-221ENST00000489019 FAM102BQ5T8I3 360 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 EMC10Q5UCC4 262 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 NAA16Q6N069 864 aaPredicted RBP3.22□□□□□ -1.89
CALD1-221ENST00000489019 CLEC4GQ6UXB4 293 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 CCDC73Q6ZRK6 1079 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 MFSD6Q6ZSS7 791 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 NBPF5PQ86XG9 351 aaPredicted RBP3.22□□□□□ -1.89
CALD1-221ENST00000489019 COL23A1Q86Y22 540 aaPredicted RBP3.22□□□□□ -1.89
CALD1-221ENST00000489019 RAB11FIP4Q86YS3 637 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 FAM109AQ8N4B1 249 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 VGLL2Q8N8G2 317 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 B3GALNT2Q8NCR0 500 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 FAM46DQ8NEK8 389 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 BRIX1Q8TDN6 353 aaKnown RBP3.22□□□□□ -1.89
CALD1-221ENST00000489019 C1GALT1C1Q96EU7 318 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 PGBD1Q96JS3 809 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 C8orf76Q96K31 380 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 FAM167AQ96KS9 214 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 NAP1L5Q96NT1 182 aaPredicted RBP3.22□□□□□ -1.89
CALD1-221ENST00000489019 PPP1R9BQ96SB3 815 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 OSBPL9Q96SU4 736 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 ARPC5LQ9BPX5 153 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 KRT23Q9C075 422 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 AMBRA1Q9C0C7 1298 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 ARMT1Q9H993 441 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 ANLNQ9NQW6 1124 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 DDX19AQ9NUU7 478 aaKnown RBP3.22□□□□□ -1.89
CALD1-221ENST00000489019 ASB6Q9NWX5 421 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 GOLGA6AQ9NYA3 693 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 PTGFRNQ9P2B2 879 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 ORC3Q9UBD5 711 aaPredicted RBP3.22□□□□□ -1.89
CALD1-221ENST00000489019 CCNL1Q9UK58 526 aaPredicted RBP3.22□□□□□ -1.89
CALD1-221ENST00000489019 PNMA8BQ9ULN7 279 aaPredicted RBP3.22□□□□□ -1.89
CALD1-221ENST00000489019 PCDHA6Q9UN73 950 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 STXBP5LQ9Y2K9 1186 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 SLC4A4Q9Y6R1 1079 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 MYH3P11055 1940 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 LTBP4Q8N2S1 1624 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 NWD2Q9ULI1 1742 aa3.22□□□□□ -1.89
CALD1-221ENST00000489019 ELP1O95163 1332 aa3.21□□□□□ -1.89
CALD1-221ENST00000489019 WDR19Q8NEZ3 1342 aa3.21□□□□□ -1.89
CALD1-221ENST00000489019 SLIT2O94813 1529 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 E2F8A0AVK6 867 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 LINC00473A8K010 186 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 SNAP23O00161 211 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 SH2B2O14492 632 aaPredicted RBP3.21□□□□□ -1.9
CALD1-221ENST00000489019 DCLK1O15075 740 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 ZBTB43O43298 467 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 TRIAP1O43715 76 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 CTDNEP1O95476 244 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 PDHA1P08559 390 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 PIM1P11309 404 aaPredicted RBP3.21□□□□□ -1.9
CALD1-221ENST00000489019 FGFR2P21802 821 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 RFC4P35249 363 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 GYG1P46976 350 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 ME1P48163 572 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 GCLCP48506 637 aaPredicted RBP3.21□□□□□ -1.9
CALD1-221ENST00000489019 ZNF134P52741 427 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 RAB1AP62820 205 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 AKAP17AQ02040 695 aaKnown RBP3.21□□□□□ -1.9
CALD1-221ENST00000489019 ITIH3Q06033 890 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 CHAF1AQ13111 956 aaPredicted RBP3.21□□□□□ -1.9
CALD1-221ENST00000489019 WTAPQ15007 396 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 STK38Q15208 465 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 GFOD2Q3B7J2 385 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 C4orf46Q504U0 113 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 DNTTIP2Q5QJE6 756 aaKnown RBP3.21□□□□□ -1.9
CALD1-221ENST00000489019 AKNAD1Q5T1N1 836 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 C10orf62Q5T681 223 aaPredicted RBP3.21□□□□□ -1.9
CALD1-221ENST00000489019 FAM160B1Q5W0V3 765 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 TBC1D9BQ66K14 1250 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 ATL3Q6DD88 541 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 SMIM5Q71RC9 77 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 CYB5R4Q7L1T6 521 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 EPM2AIP1Q7L775 607 aaPredicted RBP3.21□□□□□ -1.9
CALD1-221ENST00000489019 ZSCAN30Q86W11 494 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 MICU3Q86XE3 530 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 MB21D2Q8IYB1 491 aaPredicted RBP3.21□□□□□ -1.9
CALD1-221ENST00000489019 TCEAL8Q8IYN2 117 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 SAMD3Q8N6K7 520 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 MIGA1Q8NAN2 632 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 PCSK9Q8NBP7 692 aaKnown RBP3.21□□□□□ -1.9
CALD1-221ENST00000489019 PPP1R35Q8TAP8 253 aa3.21□□□□□ -1.9
CALD1-221ENST00000489019 SLC35G2Q8TBE7 412 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms