RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 BCLAF3A2AJT9 711 aaKnown RBP20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 GOLGA6CA6NDK9 693 aa20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 ZBBXA8MT70 800 aa20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 GOLGA6DP0CG33 693 aa20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 ALDH7A1P49419 539 aaKnown RBP20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 IFFO1Q0D2I5 559 aa20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 PRUNE1Q86TP1 453 aa20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 ZC3H18Q86VM9 953 aaKnown RBP20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 SCN4BQ8IWT1 228 aa20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 UNC45BQ8IWX7 931 aa20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 FAM204AQ9H8W3 233 aa20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 WDR6Q9NNW5 1121 aaKnown RBP20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 AAASQ9NRG9 546 aa20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 GOLGA6AQ9NYA3 693 aa20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.9■□□□□ 0.945e-10■■■□□ 16.2
ATP1A1-208ENST00000488733 COX16Q9P0S2 106 aa20.9■□□□□ 0.94
ATP1A1-208ENST00000488733 NT5C1B-RDH14C9J2C7 533 aa20.89■□□□□ 0.93
ATP1A1-208ENST00000488733 YWHAGP61981 247 aaKnown RBP eCLIP20.89■□□□□ 0.93
ATP1A1-208ENST00000488733 ZNF844Q08AG5 666 aa20.89■□□□□ 0.93
ATP1A1-208ENST00000488733 ANKS3Q6ZW76 656 aa20.89■□□□□ 0.93
ATP1A1-208ENST00000488733 TMEM173Q86WV6 379 aaPredicted RBP20.89■□□□□ 0.93
ATP1A1-208ENST00000488733 FAM71DQ8N9W8 422 aa20.89■□□□□ 0.93
ATP1A1-208ENST00000488733 SCAMP5Q8TAC9 235 aa20.89■□□□□ 0.93
ATP1A1-208ENST00000488733 RNF139Q8WU17 664 aa20.89■□□□□ 0.93
ATP1A1-208ENST00000488733 EDEM1Q92611 657 aa20.89■□□□□ 0.93
ATP1A1-208ENST00000488733 EPB41L4BQ9H329 900 aa20.89■□□□□ 0.93
ATP1A1-208ENST00000488733 CWH43Q9H720 699 aa20.89■□□□□ 0.93
ATP1A1-208ENST00000488733 COL4A4P53420 1690 aaPredicted RBP20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 RIPK2O43353 540 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 GOT1P17174 413 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 SYN1P17600 705 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 RPL22P35268 128 aaKnown RBP20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 ACTN2P35609 894 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 HCAR3P49019 387 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 CXCR3P49682 368 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 GDF10P55107 478 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 SLC29A2Q14542 456 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 RNASEH2BQ5TBB1 312 aaKnown RBP20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 BTBD8Q5XKL5 378 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 PSRC1Q6PGN9 363 aaPredicted RBP20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 C4orf22Q6V702 233 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 HOOK3Q86VS8 718 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 CDKL3Q8IVW4 592 aaPredicted RBP20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 PPIL6Q8IXY8 311 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 NUP93Q8N1F7 819 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 ARL8AQ96BM9 186 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 RTP4Q96DX8 246 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 FBXO44Q9H4M3 255 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 WDCPQ9H6R7 721 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 TMBIM4Q9HC24 238 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 ADAM21Q9UKJ8 722 aa20.88■□□□□ 0.93
ATP1A1-208ENST00000488733 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 HMGB1P1B2RPK0 211 aaPredicted RBP20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 CHKAP35790 457 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 GPR17Q13304 367 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 BTG3Q14201 252 aaPredicted RBP20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 CMTR2Q8IYT2 770 aaKnown RBP20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 PYROXD2Q8N2H3 581 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 SPPL2BQ8TCT7 592 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 C2orf15Q8WU43 125 aaKnown RBP20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 BCL7CQ8WUZ0 217 aaPredicted RBP20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 TTPALQ9BTX7 342 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 USP29Q9HBJ7 922 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 TBC1D4O60343 1298 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 AMPD1P23109 780 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 TTMPQ5BVD1 217 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 TMEM240Q5SV17 173 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 SPOUT1Q5T280 376 aaKnown RBP20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 ARHGAP18Q8N392 663 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 OR2W6PQ8NHA6 318 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 FAM76AQ8TAV0 307 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 ADAM32Q8TC27 787 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 ATP6V1G3Q96LB4 118 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 YME1L1Q96TA2 773 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 TMEM109Q9BVC6 243 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 MAGEB5Q9BZ81 275 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 PHACTR1Q9C0D0 580 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 CDC42EP4Q9H3Q1 356 aaKnown RBP20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 C10orf88Q9H8K7 445 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 ZMYND8Q9ULU4 1186 aaPredicted RBP20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 SCML2Q9UQR0 700 aa20.87■□□□□ 0.93
ATP1A1-208ENST00000488733 VWA8A3KMH1 1905 aa20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 HACD1B0YJ81 288 aa20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 EEF2KO00418 725 aaKnown RBP20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 ZNF189O75820 626 aaPredicted RBP20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 TTC4O95801 387 aa20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 CPB1P15086 417 aa20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 TERF2Q15554 542 aa20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 NCBP2-AS2Q69YL0 99 aa20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 PDZD4Q76G19 769 aaPredicted RBP20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 MON1AQ86VX9 555 aa20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 DQX1Q8TE96 717 aaKnown RBP20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 EXOC4Q96A65 974 aa20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 RBM15Q96T37 977 aaKnown RBP eCLIP20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 ARHGEF4Q9NR80 690 aa20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 PAK5Q9P286 719 aa20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 FARP1Q9Y4F1 1045 aaPredicted RBP20.86■□□□□ 0.93
ATP1A1-208ENST00000488733 KCNN4O15554 427 aa20.85■□□□□ 0.93
ATP1A1-208ENST00000488733 IGLV3-25P01717 112 aa20.85■□□□□ 0.93
ATP1A1-208ENST00000488733 SLC45A4Q5BKX6 768 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms