RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 TPTEP56180 551 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 EIF4A1P60842 406 aaKnown RBP3.76□□□□□ -1.81
CD46-215ENST00000488596 PSG6Q00889 435 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 FHL1Q13642 323 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 POSTNQ15063 836 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 ACOX1Q15067 660 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 TMEM196Q5HYL7 178 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 PCID2Q5JVF3 399 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 L1TD1Q5T7N2 865 aaKnown RBP3.76□□□□□ -1.81
CD46-215ENST00000488596 PRAMEF17Q5VTA0 474 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 RINT1Q6NUQ1 792 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 CEP85Q6P2H3 762 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 TLDC1Q6P9B6 456 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 SLC2A7Q6PXP3 512 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 TECPR1Q7Z6L1 1165 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 RAB11FIP4Q86YS3 637 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 SUGP1Q8IWZ8 645 aaKnown RBP3.76□□□□□ -1.81
CD46-215ENST00000488596 SIRT6Q8N6T7 355 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 DENND1AQ8TEH3 1009 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 TBC1D20Q96BZ9 403 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 RSPRY1Q96DX4 576 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 MCRS1Q96EZ8 462 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 PAGR1Q9BTK6 254 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 SPRTNQ9H040 489 aaPredicted RBP3.76□□□□□ -1.81
CD46-215ENST00000488596 MYLK2Q9H1R3 596 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 DUSP22Q9NRW4 184 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 HELLSQ9NRZ9 838 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 MGAT4CQ9UBM8 478 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 SH2B3Q9UQQ2 575 aa3.76□□□□□ -1.81
CD46-215ENST00000488596 H0YIZ8 118 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 IPO5O00410 1097 aaKnown RBP3.75□□□□□ -1.81
CD46-215ENST00000488596 PPEF2O14830 753 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 DHHO43323 396 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 CBFA2T3O75081 653 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 PRKCBP05771 671 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 ITGA5P08648 1049 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 VEGFAP15692 232 aaPredicted RBP3.75□□□□□ -1.81
CD46-215ENST00000488596 FPR3P25089 353 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 AKT1P31749 480 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 ALDH18A1P54886 795 aaKnown RBP3.75□□□□□ -1.81
CD46-215ENST00000488596 EEFSECP57772 596 aaKnown RBP3.75□□□□□ -1.81
CD46-215ENST00000488596 BFSP2Q13515 415 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 TAF5Q15542 800 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 TBC1D25Q3MII6 688 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 AWAT2Q6E213 333 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 LIN54Q6MZP7 749 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 CRELD2Q6UXH1 353 aaPredicted RBP3.75□□□□□ -1.81
CD46-215ENST00000488596 NAPRTQ6XQN6 538 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 LDHAL6AQ6ZMR3 332 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 GATAD2AQ86YP4 633 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 P3H2Q8IVL5 708 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 CCDC117Q8IWD4 279 aaPredicted RBP3.75□□□□□ -1.81
CD46-215ENST00000488596 SPATA5Q8NB90 893 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 MYRIPQ8NFW9 859 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 SCAMP5Q8TAC9 235 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 STT3BQ8TCJ2 826 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 LTV1Q96GA3 475 aaPredicted RBP3.75□□□□□ -1.81
CD46-215ENST00000488596 WDR24Q96S15 920 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 MACROD1Q9BQ69 325 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 WACQ9BTA9 647 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 KATNAL1Q9BW62 490 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 AGO4Q9HCK5 861 aaKnown RBP3.75□□□□□ -1.81
CD46-215ENST00000488596 ITM2CQ9NQX7 267 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 ELOVL5Q9NYP7 299 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 HERC5Q9UII4 1024 aaKnown RBP3.75□□□□□ -1.81
CD46-215ENST00000488596 AMFRQ9UKV5 643 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 CA14Q9ULX7 337 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 VPS4AQ9UN37 437 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 GABRQQ9UN88 632 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 PCDHB7Q9Y5E2 793 aa3.75□□□□□ -1.81
CD46-215ENST00000488596 PRRT4C9JH25 899 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 SMIM22K7EJ46 135 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 M0QZQ0 153 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 CER1O95813 267 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 GLP2RO95838 553 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 FGAP02671 866 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 DLDP09622 509 aaKnown RBP3.74□□□□□ -1.81
CD46-215ENST00000488596 PEPDP12955 493 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 ALADP13716 330 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 PPM1FP49593 454 aaPredicted RBP3.74□□□□□ -1.81
CD46-215ENST00000488596 DIO1P49895 249 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 PNLIPRP1P54315 467 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 FOXG1P55316 489 aaPredicted RBP3.74□□□□□ -1.81
CD46-215ENST00000488596 SUMO2P61956 95 aaKnown RBP3.74□□□□□ -1.81
CD46-215ENST00000488596 PRKG1Q13976 671 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 CLCA4Q14CN2 919 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 TRIM71Q2Q1W2 868 aaKnown RBP3.74□□□□□ -1.81
CD46-215ENST00000488596 BTBD16Q32M84 506 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 AASDHQ4L235 1098 aaPredicted RBP3.74□□□□□ -1.81
CD46-215ENST00000488596 FNDC1Q4ZHG4 1894 aaPredicted RBP3.74□□□□□ -1.81
CD46-215ENST00000488596 MSANTD2Q6P1R3 559 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 KLHL17Q6TDP4 642 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 PIK3AP1Q6ZUJ8 805 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 PTCHD4Q6ZW05 846 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 RRAGAQ7L523 313 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 WDR53Q7Z5U6 358 aaPredicted RBP3.74□□□□□ -1.81
CD46-215ENST00000488596 TTC30AQ86WT1 665 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 ABHD11Q8NFV4 315 aa3.74□□□□□ -1.81
CD46-215ENST00000488596 RP9Q8TA86 221 aaKnown RBP3.74□□□□□ -1.81
CD46-215ENST00000488596 EID2BQ96D98 161 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms