RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 ZCCHC9Q8N567 271 aaKnown RBP20■□□□□ 0.79
GGPS1-206ENST00000488594 NUP58Q9BVL2 599 aa20■□□□□ 0.79
GGPS1-206ENST00000488594 DUSP16Q9BY84 665 aa20■□□□□ 0.79
GGPS1-206ENST00000488594 NIF3L1Q9GZT8 377 aa20■□□□□ 0.79
GGPS1-206ENST00000488594 MIR1-1HGQ9H1L0 117 aa20■□□□□ 0.79
GGPS1-206ENST00000488594 PCED1AQ9H1Q7 454 aa20■□□□□ 0.79
GGPS1-206ENST00000488594 KIAA1522Q9P206 1035 aaPredicted RBP20■□□□□ 0.79
GGPS1-206ENST00000488594 DMXL2Q8TDJ6 3036 aa20■□□□□ 0.79
GGPS1-206ENST00000488594 TIMM44O43615 452 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 CALUO43852 315 aaPredicted RBP19.99■□□□□ 0.79
GGPS1-206ENST00000488594 CILPO75339 1184 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 ACADMP11310 421 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 CORO1AP31146 461 aaKnown RBP19.99■□□□□ 0.79
GGPS1-206ENST00000488594 MATKP42679 507 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 KMT5BQ4FZB7 885 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 C1orf220Q5T0J3 134 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 DCAF12L1Q5VU92 463 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 CPXM2Q8N436 756 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 PNPLA1Q8N8W4 532 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 CCDC150Q8NCX0 1101 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 P2RY11Q96G91 374 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 PAGE5Q96GU1 130 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 PIWIL1Q96J94 861 aaKnown RBP19.99■□□□□ 0.79
GGPS1-206ENST00000488594 SLC2A11Q9BYW1 496 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 CCDC86Q9H6F5 360 aaKnown RBP19.99■□□□□ 0.79
GGPS1-206ENST00000488594 GAREM1Q9H706 876 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 ELOVL2Q9NXB9 296 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 RASAL2Q9UJF2 1139 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 STRIP2Q9ULQ0 834 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 GPSM3Q9Y4H4 160 aa19.99■□□□□ 0.79
GGPS1-206ENST00000488594 KCNJ18B7U540 433 aa19.98■□□□□ 0.79
GGPS1-206ENST00000488594 KIF20AO95235 890 aa19.98■□□□□ 0.79
GGPS1-206ENST00000488594 MYL1P05976 194 aa19.98■□□□□ 0.79
GGPS1-206ENST00000488594 ENPEPQ07075 957 aa19.98■□□□□ 0.79
GGPS1-206ENST00000488594 INTS8Q75QN2 995 aaKnown RBP19.98■□□□□ 0.79
GGPS1-206ENST00000488594 SETD7Q8WTS6 366 aaKnown RBP19.98■□□□□ 0.79
GGPS1-206ENST00000488594 APOBEC3GQ9HC16 384 aaKnown RBP19.98■□□□□ 0.79
GGPS1-206ENST00000488594 TM7SF3Q9NS93 570 aa19.98■□□□□ 0.79
GGPS1-206ENST00000488594 SERTAD1Q9UHV2 236 aa19.98■□□□□ 0.79
GGPS1-206ENST00000488594 CFAP45Q9UL16 551 aa19.98■□□□□ 0.79
GGPS1-206ENST00000488594 AGO1Q9UL18 857 aaKnown RBP19.98■□□□□ 0.79
GGPS1-206ENST00000488594 TRAF3IP3Q9Y228 551 aa19.98■□□□□ 0.79
GGPS1-206ENST00000488594 PCDHGB2Q9Y5G2 931 aa19.98■□□□□ 0.79
GGPS1-206ENST00000488594 ACTN4O43707 911 aaKnown RBP19.97■□□□□ 0.79
GGPS1-206ENST00000488594 CD58P19256 250 aa19.97■□□□□ 0.79
GGPS1-206ENST00000488594 EFEMP1Q12805 493 aa19.97■□□□□ 0.79
GGPS1-206ENST00000488594 ZNF234Q14588 700 aa19.97■□□□□ 0.79
GGPS1-206ENST00000488594 TTC39CQ8N584 583 aa19.97■□□□□ 0.79
GGPS1-206ENST00000488594 TAS1R2Q8TE23 839 aa19.97■□□□□ 0.79
GGPS1-206ENST00000488594 FAXDC2Q96IV6 333 aa19.97■□□□□ 0.79
GGPS1-206ENST00000488594 CDC6Q99741 560 aa19.97■□□□□ 0.79
GGPS1-206ENST00000488594 UBXN6Q9BZV1 441 aa19.97■□□□□ 0.79
GGPS1-206ENST00000488594 MARCH2Q9P0N8 246 aa19.97■□□□□ 0.79
GGPS1-206ENST00000488594 USP25Q9UHP3 1055 aa19.97■□□□□ 0.79
GGPS1-206ENST00000488594 FLRT2O43155 660 aa19.96■□□□□ 0.79
GGPS1-206ENST00000488594 HMBSP08397 361 aa19.96■□□□□ 0.79
GGPS1-206ENST00000488594 COPAP53621 1224 aa19.96■□□□□ 0.79
GGPS1-206ENST00000488594 ARID5AQ03989 594 aa19.96■□□□□ 0.79
GGPS1-206ENST00000488594 NFIL3Q16649 462 aa19.96■□□□□ 0.79
GGPS1-206ENST00000488594 HLA-BQ31612 363 aa19.96■□□□□ 0.79
GGPS1-206ENST00000488594 PPP1R26Q5T8A7 1209 aaPredicted RBP19.96■□□□□ 0.79
GGPS1-206ENST00000488594 SERPINA13PQ6UXR4 307 aa19.96■□□□□ 0.79
GGPS1-206ENST00000488594 RSRC2Q7L4I2 434 aaKnown RBP19.96■□□□□ 0.79
GGPS1-206ENST00000488594 DENND1CQ8IV53 801 aa19.96■□□□□ 0.79
GGPS1-206ENST00000488594 DDI1Q8WTU0 396 aa19.96■□□□□ 0.79
GGPS1-206ENST00000488594 CIPCQ9C0C6 399 aa19.96■□□□□ 0.79
GGPS1-206ENST00000488594 EIF2B4Q9UI10 523 aaKnown RBP19.96■□□□□ 0.79
GGPS1-206ENST00000488594 MYH10P35580 1976 aa19.96■□□□□ 0.79
GGPS1-206ENST00000488594 ANKRD11Q6UB99 2663 aaPredicted RBP19.96■□□□□ 0.79
GGPS1-206ENST00000488594 FREM2Q5SZK8 3169 aa19.96■□□□□ 0.79
GGPS1-206ENST00000488594 EPHX1P07099 455 aa19.95■□□□□ 0.79
GGPS1-206ENST00000488594 CENPBP07199 599 aaPredicted RBP19.95■□□□□ 0.79
GGPS1-206ENST00000488594 ZSCAN22P10073 491 aaPredicted RBP19.95■□□□□ 0.79
GGPS1-206ENST00000488594 KRT13P13646 458 aa19.95■□□□□ 0.79
GGPS1-206ENST00000488594 PRKCHP24723 683 aa19.95■□□□□ 0.79
GGPS1-206ENST00000488594 GCLMP48507 274 aa19.95■□□□□ 0.79
GGPS1-206ENST00000488594 AFF3P51826 1226 aaKnown RBP19.95■□□□□ 0.79
GGPS1-206ENST00000488594 SLC8A3P57103 927 aa19.95■□□□□ 0.79
GGPS1-206ENST00000488594 FOXD4L6Q3SYB3 417 aaPredicted RBP19.95■□□□□ 0.79
GGPS1-206ENST00000488594 FOXD4L5Q5VV16 416 aaPredicted RBP19.95■□□□□ 0.79
GGPS1-206ENST00000488594 FOXD4L3Q6VB84 417 aaPredicted RBP19.95■□□□□ 0.79
GGPS1-206ENST00000488594 DBX2Q6ZNG2 339 aa19.95■□□□□ 0.79
GGPS1-206ENST00000488594 SLCO6A1Q86UG4 719 aa19.95■□□□□ 0.79
GGPS1-206ENST00000488594 FAM217AQ8IXS0 508 aa19.95■□□□□ 0.79
GGPS1-206ENST00000488594 RBBP8NLQ8NC74 664 aaPredicted RBP19.95■□□□□ 0.79
GGPS1-206ENST00000488594 FOXD4L4Q8WXT5 416 aaPredicted RBP19.95■□□□□ 0.79
GGPS1-206ENST00000488594 PLD4Q96BZ4 506 aa19.95■□□□□ 0.79
GGPS1-206ENST00000488594 HEXIM2Q96MH2 286 aaKnown RBP19.95■□□□□ 0.79
GGPS1-206ENST00000488594 IL21RQ9HBE5 538 aa19.95■□□□□ 0.79
GGPS1-206ENST00000488594 FNDC3AQ9Y2H6 1198 aaKnown RBP19.95■□□□□ 0.79
GGPS1-206ENST00000488594 DSPP15924 2871 aaKnown RBP19.95■□□□□ 0.78
GGPS1-206ENST00000488594 F13A1P00488 732 aa19.95■□□□□ 0.78
GGPS1-206ENST00000488594 NR2F2P24468 414 aa19.95■□□□□ 0.78
GGPS1-206ENST00000488594 ZNF445P59923 1031 aa19.95■□□□□ 0.78
GGPS1-206ENST00000488594 YWHAGP61981 247 aaKnown RBP eCLIP19.95■□□□□ 0.78
GGPS1-206ENST00000488594 PPP3CAQ08209 521 aa19.95■□□□□ 0.78
GGPS1-206ENST00000488594 SUZ12Q15022 739 aaKnown RBP19.95■□□□□ 0.78
GGPS1-206ENST00000488594 TMPRSS7Q7RTY8 843 aa19.95■□□□□ 0.78
GGPS1-206ENST00000488594 OR2T3Q8NH03 318 aa19.95■□□□□ 0.78
GGPS1-206ENST00000488594 C1orf216Q8TAB5 229 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms