RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ARHGAP26Q9UNA1 814 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 SH3BP1Q9Y3L3 701 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 CPQQ9Y646 472 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 PTPRDP23468 1912 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 MYH10P35580 1976 aa10.74□□□□□ -0.69
SKA1-204ENST00000488454 MDM4O15151 490 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 LCA5LO95447 670 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 OLFM2O95897 454 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 F9P00740 461 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 FYNP06241 537 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 HMBSP08397 361 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 BMP1P13497 986 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 GPD1P21695 349 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 RFC1P35251 1148 aaPredicted RBP10.73□□□□□ -0.69
SKA1-204ENST00000488454 HARS2P49590 506 aaKnown RBP10.73□□□□□ -0.69
SKA1-204ENST00000488454 SULT1E1P49888 294 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 MTF1Q14872 753 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 QPCTQ16769 361 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 SLC25A52Q3SY17 297 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 SYPL2Q5VXT5 272 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 CC2D1AQ6P1N0 951 aaPredicted RBP10.73□□□□□ -0.69
SKA1-204ENST00000488454 MSANTD2Q6P1R3 559 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 TMEM139Q8IV31 216 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 DQX1Q8TE96 717 aaKnown RBP10.73□□□□□ -0.69
SKA1-204ENST00000488454 SH3RF2Q8TEC5 729 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 RXFP2Q8WXD0 754 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 USP13Q92995 863 aaPredicted RBP10.73□□□□□ -0.69
SKA1-204ENST00000488454 ELSPBP1Q96BH3 223 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 PIWIL1Q96J94 861 aaKnown RBP10.73□□□□□ -0.69
SKA1-204ENST00000488454 MCEEQ96PE7 176 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 SLC22A12Q96S37 553 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 DDX23Q9BUQ8 820 aaKnown RBP10.73□□□□□ -0.69
SKA1-204ENST00000488454 KLF16Q9BXK1 252 aaPredicted RBP10.73□□□□□ -0.69
SKA1-204ENST00000488454 SMG9Q9H0W8 520 aaKnown RBP10.73□□□□□ -0.69
SKA1-204ENST00000488454 TRPV4Q9HBA0 871 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 GKN1Q9NS71 199 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 DDIT4Q9NX09 232 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 OBP2AQ9NY56 170 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 CTTNBP2NLQ9P2B4 639 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 SLC12A6Q9UHW9 1150 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 LSM7Q9UK45 103 aaKnown RBP10.73□□□□□ -0.69
SKA1-204ENST00000488454 NENFQ9UMX5 172 aa10.73□□□□□ -0.69
SKA1-204ENST00000488454 HBS1LQ9Y450 684 aaKnown RBP10.73□□□□□ -0.69
SKA1-204ENST00000488454 SYNJ2BP-COX16A0A087WUM0 186 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 C2CD4BA6NLJ0 364 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 HEPACAM2A8MVW5 462 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 M0QYT0 321 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 MYO1FO00160 1098 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 LEFTY2O00292 366 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 ZNF263O14978 683 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 ECI2O75521 394 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 GJB6O95452 261 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 TRUB2O95900 331 aaKnown RBP10.72□□□□□ -0.69
SKA1-204ENST00000488454 CYP1A2P05177 515 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 IRF1P10914 325 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 SLC2A3P11169 496 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 FLT3P36888 993 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 VIPR2P41587 438 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 NOP2P46087 812 aaKnown RBP10.72□□□□□ -0.69
SKA1-204ENST00000488454 ZNF143P52747 638 aaPredicted RBP10.72□□□□□ -0.69
SKA1-204ENST00000488454 TBX4P57082 545 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 DEUP1Q05D60 604 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 NME3Q13232 169 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 TANGO2Q6ICL3 276 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 PARM1Q6UWI2 310 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 TRIM67Q6ZTA4 783 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.72□□□□□ -0.69
SKA1-204ENST00000488454 UNC45BQ8IWX7 931 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 RHOT2Q8IXI1 618 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 EMC1Q8N766 993 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 JOSD2Q8TAC2 188 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 ADAM32Q8TC27 787 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 BPIFB1Q8TDL5 484 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 CFAP57Q96MR6 1250 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 PPP1R9BQ96SB3 815 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 NUP85Q9BW27 656 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 PACSIN1Q9BY11 444 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 DCLK3Q9C098 648 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 SMOC2Q9H3U7 446 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 COX16Q9P0S2 106 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 CFAP97Q9P2B7 532 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 IGSF9Q9P2J2 1179 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 UVRAGQ9P2Y5 699 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 LCMT1Q9UIC8 334 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 TLR6Q9Y2C9 796 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 ZNF510Q9Y2H8 683 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 PAXBP1Q9Y5B6 917 aa10.72□□□□□ -0.69
SKA1-204ENST00000488454 TCRBV5S1A1TA0A578 114 aa10.71□□□□□ -0.69
SKA1-204ENST00000488454 E2F8A0AVK6 867 aa10.71□□□□□ -0.69
SKA1-204ENST00000488454 TMEM191CA6NGB0 347 aa10.71□□□□□ -0.69
SKA1-204ENST00000488454 LOC730098B7Z3J9 87 aa10.71□□□□□ -0.69
SKA1-204ENST00000488454 CFAP99D6REC4 459 aa10.71□□□□□ -0.69
SKA1-204ENST00000488454 ANHXE9PGG2 379 aa10.71□□□□□ -0.69
SKA1-204ENST00000488454 SLC9A3R1O14745 358 aaPredicted RBP10.71□□□□□ -0.69
SKA1-204ENST00000488454 ZBTB24O43167 697 aaPredicted RBP10.71□□□□□ -0.69
SKA1-204ENST00000488454 GFRA3O60609 400 aa10.71□□□□□ -0.69
SKA1-204ENST00000488454 RNF8O76064 485 aa10.71□□□□□ -0.69
SKA1-204ENST00000488454 PRAMEF12O95522 483 aa10.71□□□□□ -0.69
SKA1-204ENST00000488454 APOEP02649 317 aa10.71□□□□□ -0.69
SKA1-204ENST00000488454 PSMC3P17980 439 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms