RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, human

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCYT1A-215	ENST00000488235	SMC2	O95347	1197 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	CD19	P15391	556 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	IL12RB1	P42701	662 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	RGS7	P49802	495 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	SGSH	P51688	502 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	BCAT1	P54687	386 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	NUCB2	P80303	420 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	COG7	P83436	770 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	RPL6	Q02878	288 aa	Known RBP	11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	TRIP4	Q15650	581 aa	Predicted RBP	11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	PREPL	Q4J6C6	727 aa	Predicted RBP	11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	SGO2	Q562F6	1265 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	TRIM61	Q5EBN2	209 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	LYSMD4	Q5XG99	296 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	TRMT11	Q7Z4G4	463 aa	Known RBP	11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	FMNL3	Q8IVF7	1028 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	ARHGEF19	Q8IW93	802 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	FAM217A	Q8IXS0	508 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	CLEC4C	Q8WTT0	213 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	PIWIL1	Q96J94	861 aa	Known RBP	11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	MKRN2	Q9H000	416 aa	Known RBP	11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	CYP8B1	Q9UNU6	501 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	SLC27A6	Q9Y2P4	619 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	STON1	Q9Y6Q2	735 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	NBEA	Q8NFP9	2946 aa		11.75	□□□□□ -0.53
PCYT1A-215	ENST00000488235	TSPAN3	O60637	253 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	TOP3B	O95985	862 aa	Known RBP	11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	VDR	P11473	427 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	LCP1	P13796	627 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	ENG	P17813	658 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	PRKCH	P24723	683 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	BRD2	P25440	801 aa	Known RBP	11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	HOXD9	P28356	352 aa	Predicted RBP	11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	MAPK8	P45983	427 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	STX17	P56962	302 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	BST2	Q10589	180 aa	Known RBP	11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	MORC3	Q14149	939 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	FUT11	Q495W5	492 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	BSPRY	Q5W0U4	402 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	PMF1	Q6P1K2	205 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	TMEM270	Q6UE05	265 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	LCLAT1	Q6UWP7	414 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	RSRC2	Q7L4I2	434 aa	Known RBP	11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	RRAGA	Q7L523	313 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	TADA2B	Q86TJ2	420 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	SYT12	Q8IV01	421 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	ARHGAP18	Q8N392	663 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	OR2I1P	Q8NGU4	316 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	SLC35F5	Q8WV83	523 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	NELFB	Q8WX92	580 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	DDX1	Q92499	740 aa	Known RBP	11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	CCDC34	Q96HJ3	373 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	KREMEN1	Q96MU8	473 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	LRRC4	Q9HBW1	653 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	TMEM9B	Q9NQ34	198 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	EVL	Q9UI08	416 aa	Predicted RBP	11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	CTNND2	Q9UQB3	1225 aa		11.74	□□□□□ -0.53
PCYT1A-215	ENST00000488235	KCNJ18	B7U540	433 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	LOC400499	M0QZD8	3231 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	PSMA7	O14818	248 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	SPINK2	P20155	84 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	PI4KA	P42356	2102 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	NOVA1	P51513	510 aa	Known RBP	11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	ZNF132	P52740	706 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	DAOA	P59103	153 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	ZNF33A	Q06730	810 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	ENPP2	Q13822	863 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	BECN1	Q14457	450 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	ZNF234	Q14588	700 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	UAP1L1	Q3KQV9	507 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	SH3PXD2A	Q5TCZ1	1133 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	NUDT18	Q6ZVK8	323 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	CACUL1	Q86Y37	369 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	PPM1K	Q8N3J5	372 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	CPXM2	Q8N436	756 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	WFDC5	Q8TCV5	224 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	KCTD13	Q8WZ19	329 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	MYEOV	Q96EZ4	313 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	HSPA12B	Q96MM6	686 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	CEP63	Q96MT8	703 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	NT5C1B	Q96P26	610 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	IPO9	Q96P70	1041 aa	Known RBP	11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	DCLK3	Q9C098	648 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	CAPN10	Q9HC96	672 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	STRIP2	Q9ULQ0	834 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	WASF3	Q9UPY6	502 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	ZNF510	Q9Y2H8	683 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	PCDHB4	Q9Y5E5	795 aa		11.73	□□□□□ -0.53
PCYT1A-215	ENST00000488235	PCDH15	Q96QU1	1955 aa		11.72	□□□□□ -0.53
PCYT1A-215	ENST00000488235	GOLGA6L7	A0A1B0GV03	622 aa		11.72	□□□□□ -0.53
PCYT1A-215	ENST00000488235	PMM2	O15305	246 aa		11.72	□□□□□ -0.53
PCYT1A-215	ENST00000488235	CFI	P05156	583 aa		11.72	□□□□□ -0.53
PCYT1A-215	ENST00000488235	FYN	P06241	537 aa		11.72	□□□□□ -0.53

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