RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 TMEM110Q86TL2 294 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 KBTBD6Q86V97 674 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 PASD1Q8IV76 773 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 FAM217AQ8IXS0 508 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 DDI1Q8WTU0 396 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 LSM14BQ9BX40 385 aaKnown RBP21.31■■□□□ 1
HDAC4-209ENST00000487617 TPSD1Q9BZJ3 242 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 POLMQ9NP87 494 aaPredicted RBP21.31■■□□□ 1
HDAC4-209ENST00000487617 FBXO10Q9UK96 956 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 HCN2Q9UL51 889 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 USP18Q9UMW8 372 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 KIAA1549LQ6ZVL6 1849 aa21.31■■□□□ 1
HDAC4-209ENST00000487617 PAPSS1O43252 624 aaPredicted RBP21.3■■□□□ 1
HDAC4-209ENST00000487617 TSPAN3O60637 253 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 LATS1O95835 1130 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 FYNP06241 537 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 WASP42768 502 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 TBX4P57082 545 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 SPEM2Q0P670 501 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 PDCLQ13371 301 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 STX1AQ16623 288 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 USP39Q53GS9 565 aaKnown RBP21.3■■□□□ 1
HDAC4-209ENST00000487617 KLHDC7AQ5VTJ3 777 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 C11orf57Q6ZUT1 292 aaPredicted RBP21.3■■□□□ 1
HDAC4-209ENST00000487617 SLC47A2Q86VL8 602 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 RASSF3Q86WH2 238 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 MDGA1Q8NFP4 955 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 TRIM62Q9BVG3 475 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 VPS16Q9H269 839 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 PCDHGC3Q9UN70 934 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 NAALADL1Q9UQQ1 740 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 SLC27A6Q9Y2P4 619 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 FHOD1Q9Y613 1164 aa21.3■■□□□ 1
HDAC4-209ENST00000487617 TCRBV21S2A2A0A5A6 115 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 CAPN9O14815 690 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 DCLK1O15075 740 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 IGLV3-27P01718 113 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 TPM2P07951 284 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 NTSR1P30989 418 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 CLCN1P35523 988 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 KRT9P35527 623 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 BPIFB4P59827 614 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 DRAP1Q14919 205 aaPredicted RBP21.29■■□□□ 1
HDAC4-209ENST00000487617 KRT31Q15323 416 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 MPPE1Q53F39 396 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 ADGRF1Q5T601 910 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 CDKAL1Q5VV42 579 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 NUGGCQ68CJ6 796 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 SDE2Q6IQ49 451 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 UNC45BQ8IWX7 931 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 FAM71AQ8IYT1 594 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 CHPFQ8IZ52 775 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 DQX1Q8TE96 717 aaKnown RBP21.29■■□□□ 1
HDAC4-209ENST00000487617 PARD6AQ9NPB6 346 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 FANCLQ9NW38 375 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 BCCIPQ9P287 314 aaKnown RBP eCLIP21.29■■□□□ 1
HDAC4-209ENST00000487617 STOML2Q9UJZ1 356 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 INVSQ9Y283 1065 aa21.29■■□□□ 1
HDAC4-209ENST00000487617 HOXB2P14652 356 aa21.28■■□□□ 1
HDAC4-209ENST00000487617 SLC11A2P49281 568 aa21.28■■□□□ 1
HDAC4-209ENST00000487617 ZNF445P59923 1031 aa21.28■■□□□ 1
HDAC4-209ENST00000487617 RING1Q06587 406 aa21.28■■□□□ 1
HDAC4-209ENST00000487617 WDTC1Q8N5D0 677 aa21.28■■□□□ 1
HDAC4-209ENST00000487617 HMGB4Q8WW32 186 aa21.28■■□□□ 1
HDAC4-209ENST00000487617 TMA16Q96EY4 203 aaKnown RBP21.28■■□□□ 1
HDAC4-209ENST00000487617 PPP1R13BQ96KQ4 1090 aa21.28■■□□□ 1
HDAC4-209ENST00000487617 SERPINB11Q96P15 392 aa21.28■■□□□ 1
HDAC4-209ENST00000487617 NOX5Q96PH1 765 aa21.28■■□□□ 1
HDAC4-209ENST00000487617 ACOX2Q99424 681 aa21.28■■□□□ 1
HDAC4-209ENST00000487617 LHX5Q9H2C1 402 aa21.28■■□□□ 1
HDAC4-209ENST00000487617 TJP2Q9UDY2 1190 aa21.28■■□□□ 1
HDAC4-209ENST00000487617 CLEC4EQ9ULY5 219 aa21.28■■□□□ 1
HDAC4-209ENST00000487617 LRP3O75074 770 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 UCHL3P15374 230 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 TGM1P22735 817 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 GBP1P32455 592 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 YWHAZP63104 245 aaKnown RBP21.27■■□□□ 1
HDAC4-209ENST00000487617 MYL5Q02045 173 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 GEN1Q17RS7 908 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 PLK5Q496M5 336 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 SYPL2Q5VXT5 272 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 BEND5Q7L4P6 421 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 ANKS1BQ7Z6G8 1248 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 TAC4Q86UU9 113 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 PGBD3Q8N328 593 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 C1orf131Q8NDD1 294 aaKnown RBP21.27■■□□□ 1
HDAC4-209ENST00000487617 ADAM32Q8TC27 787 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 LOXL4Q96JB6 756 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 ZC3H10Q96K80 434 aaKnown RBP21.27■■□□□ 1
HDAC4-209ENST00000487617 CPXM1Q96SM3 734 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 SLC2A11Q9BYW1 496 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 POPDC2Q9HBU9 364 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 TLR6Q9Y2C9 796 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 CEP83Q9Y592 693 aa21.27■■□□□ 1
HDAC4-209ENST00000487617 GOLGA6L7A0A1B0GV03 622 aa21.26■□□□□ 0.99
HDAC4-209ENST00000487617 ACSL4O60488 711 aa21.26■□□□□ 0.99
HDAC4-209ENST00000487617 HOXD9P28356 352 aaPredicted RBP21.26■□□□□ 0.99
HDAC4-209ENST00000487617 ID4P47928 161 aa21.26■□□□□ 0.99
HDAC4-209ENST00000487617 NNTQ13423 1086 aa21.26■□□□□ 0.99
HDAC4-209ENST00000487617 ELF2Q15723 593 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms