RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 ARID5BQ14865 1188 aa20.37■□□□□ 0.85
SEC22A-208ENST00000487572 ANO4Q32M45 955 aa20.37■□□□□ 0.85
SEC22A-208ENST00000487572 ZC3H12AQ5D1E8 599 aaKnown RBP20.37■□□□□ 0.85
SEC22A-208ENST00000487572 TMEM31Q5JXX7 168 aa20.37■□□□□ 0.85
SEC22A-208ENST00000487572 LY6G5CQ5SRR4 150 aa20.37■□□□□ 0.85
SEC22A-208ENST00000487572 NUGGCQ68CJ6 796 aa20.37■□□□□ 0.85
SEC22A-208ENST00000487572 RHBDF2Q6PJF5 856 aa20.37■□□□□ 0.85
SEC22A-208ENST00000487572 TPGS1Q6ZTW0 290 aa20.37■□□□□ 0.85
SEC22A-208ENST00000487572 C3orf20Q8ND61 904 aa20.37■□□□□ 0.85
SEC22A-208ENST00000487572 JOSD2Q8TAC2 188 aa20.37■□□□□ 0.85
SEC22A-208ENST00000487572 RNF34Q969K3 372 aa20.37■□□□□ 0.85
SEC22A-208ENST00000487572 FCRL2Q96LA5 508 aaPredicted RBP20.37■□□□□ 0.85
SEC22A-208ENST00000487572 FOXQ1Q9C009 403 aa20.37■□□□□ 0.85
SEC22A-208ENST00000487572 DEF6Q9H4E7 631 aa20.37■□□□□ 0.85
SEC22A-208ENST00000487572 NDRG2Q9UN36 371 aaKnown RBP20.37■□□□□ 0.85
SEC22A-208ENST00000487572 TECTAO75443 2155 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 IGLV3-25P01717 112 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 IGLV3-27P01718 113 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 KRT3P12035 628 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 GLULP15104 373 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 TFE3P19532 575 aaPredicted RBP20.36■□□□□ 0.85
SEC22A-208ENST00000487572 GSCP56915 257 aaPredicted RBP20.36■□□□□ 0.85
SEC22A-208ENST00000487572 STARD6P59095 220 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 RING1Q06587 406 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 NNTQ13423 1086 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 UBXN2BQ14CS0 331 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 TRNP1Q6NT89 227 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 TXNDC11Q6PKC3 985 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 ZNF852Q6ZMS4 543 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 RALGPS2Q86X27 583 aaPredicted RBP20.36■□□□□ 0.85
SEC22A-208ENST00000487572 TMEM25Q86YD3 366 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 UNC45BQ8IWX7 931 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 TC2NQ8N9U0 490 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 FAM3CQ92520 227 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 BHMTQ93088 406 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 CFAP57Q96MR6 1250 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 TBCBQ99426 244 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 DDX23Q9BUQ8 820 aaKnown RBP20.36■□□□□ 0.85
SEC22A-208ENST00000487572 SPHK2Q9NRA0 654 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 CUL9Q8IWT3 2517 aa20.36■□□□□ 0.85
SEC22A-208ENST00000487572 KANSL1LA0AUZ9 987 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 SHISA7A6NL88 538 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 MAN2B1O00754 1011 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 TRDMT1O14717 391 aaKnown RBP20.35■□□□□ 0.85
SEC22A-208ENST00000487572 GPR37L1O60883 481 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 APOEP02649 317 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 ADH5P11766 374 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 GFPT1Q06210 699 aaPredicted RBP20.35■□□□□ 0.85
SEC22A-208ENST00000487572 PON2Q15165 354 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 OTUD1Q5VV17 481 aaPredicted RBP20.35■□□□□ 0.85
SEC22A-208ENST00000487572 NAIF1Q69YI7 327 aaPredicted RBP20.35■□□□□ 0.85
SEC22A-208ENST00000487572 SPC24Q8NBT2 197 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 RXFP2Q8WXD0 754 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 ZNF653Q96CK0 615 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 CHFRQ96EP1 664 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 SLC39A13Q96H72 371 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 VCPIP1Q96JH7 1222 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 MCEEQ96PE7 176 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 NPY6RQ99463 290 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 CHP1Q99653 195 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 ADAM33Q9BZ11 813 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 RRN3Q9NYV6 651 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 CALCOCO1Q9P1Z2 691 aa20.35■□□□□ 0.85
SEC22A-208ENST00000487572 TRIOO75962 3097 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 ANKRD62A6NC57 917 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 SIGLEC16A6NMB1 481 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 NEDD8-MDP1E9PL57 170 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 PDGFRAP16234 1089 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 ABCB4P21439 1286 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 RFC1P35251 1148 aaPredicted RBP20.34■□□□□ 0.85
SEC22A-208ENST00000487572 SLC11A2P49281 568 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 MLLT6P55198 1093 aaPredicted RBP20.34■□□□□ 0.85
SEC22A-208ENST00000487572 ATP11AP98196 1134 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 AMPD2Q01433 879 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 GAD2Q05329 585 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 SLC25A52Q3SY17 297 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 CCDC122Q5T0U0 273 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 CWF19L1Q69YN2 538 aaKnown RBP20.34■□□□□ 0.85
SEC22A-208ENST00000487572 DCUN1D2Q6PH85 259 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 MSANTD3Q96H12 275 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 BBS2Q9BXC9 721 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 ISCUQ9H1K1 167 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 LTB4R2Q9NPC1 389 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 PIGVQ9NUD9 493 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 MYO1AQ9UBC5 1043 aa20.34■□□□□ 0.85
SEC22A-208ENST00000487572 CNOT8Q9UFF9 292 aaKnown RBP20.34■□□□□ 0.85
SEC22A-208ENST00000487572 MRPS17Q9Y2R5 130 aaKnown RBP20.34■□□□□ 0.85
SEC22A-208ENST00000487572 MTF2Q9Y483 593 aaPredicted RBP20.34■□□□□ 0.85
SEC22A-208ENST00000487572 GOLGA6L7A0A1B0GV03 622 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 TCRBV5S1A1TA0A578 114 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 C2CD4BA6NLJ0 364 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 PRR33A8MZF0 331 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 AKR1B10O60218 316 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 ACSL4O60488 711 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 TSPAN3O60637 253 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 CDC25BP30305 580 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 SDC4P31431 198 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 CCR1P32246 355 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 CHKAP35790 457 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 DEUP1Q05D60 604 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms