RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ZBBXA8MT70 800 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 H7C0C1 242 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 SGK1O00141 431 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 OPA1O60313 960 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 SASH3O75995 380 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 EFEMP2O95967 443 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 FGBP02675 491 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 SOD2P04179 222 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 FYNP06241 537 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 FAM153BP0C7A2 387 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 ACRP10323 421 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 RBP3P10745 1247 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 HAPLN1P10915 354 aaPredicted RBP7.31□□□□□ -1.24
SF3A3-206ENST00000487062 STIP1P31948 543 aaKnown RBP7.31□□□□□ -1.24
SF3A3-206ENST00000487062 ADRA1BP35368 520 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 SOX11P35716 441 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 HSPA9P38646 679 aaKnown RBP7.31□□□□□ -1.24
SF3A3-206ENST00000487062 PBX3P40426 434 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 ATP5OP48047 213 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 TUFMP49411 452 aaKnown RBP7.31□□□□□ -1.24
SF3A3-206ENST00000487062 GLUD2P49448 558 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 CXCR3P49682 368 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 ATXN1P54253 815 aaKnown RBP7.31□□□□□ -1.24
SF3A3-206ENST00000487062 PLTPP55058 493 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 USP46P62068 366 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 DEFB103AP81534 67 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 ROR1Q01973 937 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 CREMQ03060 361 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 FPGSQ05932 587 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 SCAPQ12770 1279 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 XRCC4Q13426 336 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 SLMAPQ14BN4 828 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 TRADDQ15628 312 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 CA9Q16790 459 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 MGAT5BQ3V5L5 792 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 FAM153CQ494X1 144 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 SPDYCQ5MJ68 293 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 BRMS1LQ5PSV4 323 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 RTP2Q5QGT7 225 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 CFAP58Q5T655 872 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 OTUD1Q5VV17 481 aaPredicted RBP7.31□□□□□ -1.24
SF3A3-206ENST00000487062 TPGS2Q68CL5 300 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 SLC9A4Q6AI14 798 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 FAM117BQ6P1L5 589 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 DARS2Q6PI48 645 aaKnown RBP7.31□□□□□ -1.24
SF3A3-206ENST00000487062 C1orf228Q6PIY5 440 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 PRSS55Q6UWB4 352 aaPredicted RBP7.31□□□□□ -1.24
SF3A3-206ENST00000487062 DENND5BQ6ZUT9 1274 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 PDZD4Q76G19 769 aaPredicted RBP7.31□□□□□ -1.24
SF3A3-206ENST00000487062 BHLHA9Q7RTU4 235 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 PCGF5Q86SE9 256 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 RNF168Q8IYW5 571 aaPredicted RBP7.31□□□□□ -1.24
SF3A3-206ENST00000487062 SLC39A11Q8N1S5 342 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 CCDC185Q8N715 623 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 GOLGA6L1Q8N7Z2 621 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 COLGALT1Q8NBJ5 622 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 SCAMP5Q8TAC9 235 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 PRR7Q8TB68 274 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 DQX1Q8TE96 717 aaKnown RBP7.31□□□□□ -1.24
SF3A3-206ENST00000487062 EDEM1Q92611 657 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 ART4Q93070 314 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 RNF34Q969K3 372 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 FBXO32Q969P5 355 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 VWCEQ96DN2 955 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 PKNOX2Q96KN3 472 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 SPATA17Q96L03 361 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 B3GALT6Q96L58 329 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 GDAP1L1Q96MZ0 367 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 PGLYRP2Q96PD5 576 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 KCTD15Q96SI1 283 aaPredicted RBP7.31□□□□□ -1.24
SF3A3-206ENST00000487062 YME1L1Q96TA2 773 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 FAM118BQ9BPY3 351 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 FERMT1Q9BQL6 677 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 HERC2P3Q9BVR0 1158 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 FOXP3Q9BZS1 431 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 WDCPQ9H6R7 721 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 PCDH9Q9HC56 1237 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 PRDM10Q9NQV6 1147 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 IGSF5Q9NSI5 407 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 OLA1Q9NTK5 396 aaKnown RBP7.31□□□□□ -1.24
SF3A3-206ENST00000487062 PIGVQ9NUD9 493 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 GRHL1Q9NZI5 618 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 HSFX1Q9UBD0 423 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 FAM153AQ9UHL3 310 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 ANAPC5Q9UJX4 755 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 FBXW11Q9UKB1 542 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 SSX2IPQ9Y2D8 614 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 PCDHB12Q9Y5F1 795 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 CDY1Q9Y6F8 540 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 COL4A6Q14031 1691 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 ALPK3Q96L96 1907 aa7.31□□□□□ -1.24
SF3A3-206ENST00000487062 CENPFP49454 3210 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 A0A1W2PQH9 124 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 GOLGA6BA6NDN3 693 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 SMAPO00193 183 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 EEF2KO00418 725 aaKnown RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 DNALI1O14645 258 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-206ENST00000487062 CREB3O43889 395 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 IFNB1P01574 187 aa7.3□□□□□ -1.24
SF3A3-206ENST00000487062 URODP06132 367 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms