RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PYROXD2Q8N2H3 581 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 PQLC3Q8N755 202 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 PPP2R3CQ969Q6 453 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 OPTNQ96CV9 577 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 TRAPPC9Q96Q05 1148 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 POMPQ9Y244 141 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 CSPG5O95196 566 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 MT-CO1P00395 513 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 CPOXP36551 454 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 RAP1GDS1P52306 607 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 COG7P83436 770 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 PDPK2PQ6A1A2 396 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 CHSY1Q86X52 802 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 TP53INP2Q8IXH6 220 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.79□□□□□ -0.36
HSPG2-211ENST00000486901 PNPLA1Q8N8W4 532 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 NAT14Q8WUY8 206 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 LGMNQ99538 433 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 TMEM216Q9P0N5 145 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 LAMA3Q16787 3333 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 CNTNAP1P78357 1384 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 DOCK5Q9H7D0 1870 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 C15orf38-AP3S2A0A0A6YYH1 394 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 E7ESA3 106 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 XPO1O14980 1071 aaKnown RBP12.78□□□□□ -0.36
HSPG2-211ENST00000486901 MICAL2O94851 1124 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 APOEP02649 317 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 NFICP08651 508 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 KCNJ11Q14654 390 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 TLR1Q15399 786 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 TEX44Q53QW1 395 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 SAMD7Q7Z3H4 446 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 ARPINQ7Z6K5 226 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 PLD5Q8N7P1 536 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 GRIN3AQ8TCU5 1115 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 PPP4R1Q8TF05 950 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 CLEC4CQ8WTT0 213 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 FAM172AQ8WUF8 416 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 CDH22Q9UJ99 828 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 CREB3O43889 395 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 MAGEC1O60732 1142 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 KRT38O76015 456 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 POLR2BP30876 1174 aaKnown RBP12.78□□□□□ -0.36
HSPG2-211ENST00000486901 SULF1Q8IWU6 871 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 TMEM165Q9HC07 324 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 ANLNQ9NQW6 1124 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 ANKRD33BA6NCL7 494 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 TBC1D12O60347 775 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 EPHA3P29320 983 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 ASPAP45381 313 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 GALK1P51570 392 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 RABGGTBP53611 331 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 SLC9B1Q4ZJI4 515 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 PDSS2Q86YH6 399 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 TTC13Q8NBP0 860 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 CCNYQ8ND76 341 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 PIWIL2Q8TC59 973 aaKnown RBP12.78□□□□□ -0.36
HSPG2-211ENST00000486901 MAPK15Q8TD08 544 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 TFB1MQ8WVM0 346 aaKnown RBP12.78□□□□□ -0.36
HSPG2-211ENST00000486901 ELOVL4Q9GZR5 314 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 USP29Q9HBJ7 922 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 STK32BQ9NY57 414 aa12.78□□□□□ -0.36
HSPG2-211ENST00000486901 ZBTB14O43829 449 aa12.77□□□□□ -0.36
HSPG2-211ENST00000486901 TGDSO95455 350 aa12.77□□□□□ -0.36
HSPG2-211ENST00000486901 MGAT1P26572 445 aa12.77□□□□□ -0.36
HSPG2-211ENST00000486901 TYK2P29597 1187 aa12.77□□□□□ -0.36
HSPG2-211ENST00000486901 DNAL1Q4LDG9 190 aa12.77□□□□□ -0.36
HSPG2-211ENST00000486901 XKR3Q5GH77 459 aa12.77□□□□□ -0.36
HSPG2-211ENST00000486901 TEDDM1Q5T9Z0 273 aa12.77□□□□□ -0.36
HSPG2-211ENST00000486901 ZNF781Q8N8C0 355 aa12.77□□□□□ -0.36
HSPG2-211ENST00000486901 ICA1LQ8NDH6 482 aa12.77□□□□□ -0.36
HSPG2-211ENST00000486901 PCDH19Q8TAB3 1148 aa12.77□□□□□ -0.36
HSPG2-211ENST00000486901 OR52B2Q96RD2 323 aa12.77□□□□□ -0.36
HSPG2-211ENST00000486901 DMAP1Q9NPF5 467 aaPredicted RBP12.77□□□□□ -0.36
HSPG2-211ENST00000486901 UBAP1Q9NZ09 502 aa12.77□□□□□ -0.36
HSPG2-211ENST00000486901 TDRKHQ9Y2W6 561 aaKnown RBP12.77□□□□□ -0.36
HSPG2-211ENST00000486901 KLRG2A4D1S0 409 aaPredicted RBP12.77□□□□□ -0.37
HSPG2-211ENST00000486901 SDR42E2A6NKP2 422 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 VWA5AO00534 786 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 RGL2O15211 777 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 CRABP2P29373 138 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 AVPR1AP37288 418 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 SNRPFP62306 86 aaKnown RBP12.77□□□□□ -0.37
HSPG2-211ENST00000486901 PDE1CQ14123 709 aaPredicted RBP12.77□□□□□ -0.37
HSPG2-211ENST00000486901 ZNF667Q5HYK9 610 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 LGSNQ5TDP6 509 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 LRRC38Q5VT99 294 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 FAM183BPQ6ZVS7 135 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 PLD6Q8N2A8 252 aaKnown RBP12.77□□□□□ -0.37
HSPG2-211ENST00000486901 FAM81AQ8TBF8 368 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 TMA16Q96EY4 203 aaKnown RBP12.77□□□□□ -0.37
HSPG2-211ENST00000486901 KLC2Q9H0B6 622 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 VCX3BQ9H321 246 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 VCX3AQ9NNX9 186 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 UBP1Q9NZI7 540 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 DTNAQ9Y4J8 743 aa12.77□□□□□ -0.37
HSPG2-211ENST00000486901 SERPINA6P08185 405 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 IDH3AP50213 366 aa12.76□□□□□ -0.37
HSPG2-211ENST00000486901 CLCN3P51790 818 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms