RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 DDIT4Q9NX09 232 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 ARHGEF38Q9NXL2 777 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 CLIC5Q9NZA1 410 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 CALCOCO1Q9P1Z2 691 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 MAFFQ9ULX9 164 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 C5orf60A6NFR6 353 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 H7C0C1 242 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 DCLK1O15075 740 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 ALOX15BO15296 676 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 CHADO15335 359 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 IRAK2O43187 625 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 RIPK2O43353 540 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 GCATO75600 419 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 AMHP03971 560 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 HAPLN1P10915 354 aaPredicted RBP12.05□□□□□ -0.48
PRKCB-207ENST00000486868 SLC2A3P11169 496 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 RPL22P35268 128 aaKnown RBP12.05□□□□□ -0.48
PRKCB-207ENST00000486868 ATP5OP48047 213 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 GATMP50440 423 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 PITX1P78337 314 aaPredicted RBP12.05□□□□□ -0.48
PRKCB-207ENST00000486868 ZNF33AQ06730 810 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 ZNF844Q08AG5 666 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 PDK1Q15118 436 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 PPP6R3Q5H9R7 873 aaPredicted RBP12.05□□□□□ -0.48
PRKCB-207ENST00000486868 C6orf118Q5T5N4 469 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 NCBP2-AS2Q69YL0 99 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 NECAB2Q7Z6G3 386 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 UNC45BQ8IWX7 931 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 CMTR2Q8IYT2 770 aaKnown RBP12.05□□□□□ -0.48
PRKCB-207ENST00000486868 NAT8LQ8N9F0 302 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 QKIQ96PU8 341 aaKnown RBP eCLIP12.05□□□□□ -0.482e-6■■■■■ 35
PRKCB-207ENST00000486868 FAM118BQ9BPY3 351 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 RHOBTB2Q9BYZ6 727 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 SEMA4AQ9H3S1 761 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 WDCPQ9H6R7 721 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 FAM204AQ9H8W3 233 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 RC3H2Q9HBD1 1191 aaKnown RBP12.05□□□□□ -0.48
PRKCB-207ENST00000486868 ARHGEF4Q9NR80 690 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 OLA1Q9NTK5 396 aaKnown RBP12.05□□□□□ -0.48
PRKCB-207ENST00000486868 ABI2Q9NYB9 513 aaPredicted RBP12.05□□□□□ -0.48
PRKCB-207ENST00000486868 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.05□□□□□ -0.48
PRKCB-207ENST00000486868 FNIP2Q9P278 1114 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 MTRRQ9UBK8 725 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 ATP11BQ9Y2G3 1177 aa12.05□□□□□ -0.48
PRKCB-207ENST00000486868 TANC1Q9C0D5 1861 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 MTMR11A4FU01 709 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 GOLGA6CA6NDK9 693 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 E7ESA3 106 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 EEF2KO00418 725 aaKnown RBP12.04□□□□□ -0.48
PRKCB-207ENST00000486868 MYCP01106 439 aaPredicted RBP12.04□□□□□ -0.48
PRKCB-207ENST00000486868 IFNB1P01574 187 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 GOLGA6DP0CG33 693 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 GOT1P17174 413 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 TUFMP49411 452 aaKnown RBP12.04□□□□□ -0.48
PRKCB-207ENST00000486868 GLUD2P49448 558 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 NME3Q13232 169 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 TRIP13Q15645 432 aaPredicted RBP12.04□□□□□ -0.48
PRKCB-207ENST00000486868 CEP85LQ5SZL2 805 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 TPGS2Q68CL5 300 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 MFSD5Q6N075 450 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.04□□□□□ -0.483e-12■□□□□ 10.2
PRKCB-207ENST00000486868 DENND5BQ6ZUT9 1274 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 RFX8Q6ZV50 586 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 CENPUQ71F23 418 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 DEFB128Q7Z7B8 93 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 SCD5Q86SK9 330 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 TAC4Q86UU9 113 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 TMEM199Q8N511 208 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 FAM71DQ8N9W8 422 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 GLIS1Q8NBF1 620 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 SCAMP5Q8TAC9 235 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 FAM76AQ8TAV0 307 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 DIS3LQ8TF46 1054 aaKnown RBP12.04□□□□□ -0.48
PRKCB-207ENST00000486868 OVCA2Q8WZ82 227 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 CPT1BQ92523 772 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 PRCCQ92733 491 aaPredicted RBP12.04□□□□□ -0.48
PRKCB-207ENST00000486868 PGM2Q96G03 612 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 IGSF21Q96ID5 467 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 ATP6V1G3Q96LB4 118 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 C1orf74Q96LT6 269 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 SERPINB11Q96P15 392 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 EPAS1Q99814 870 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 TTLL2Q9BWV7 592 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 STMN4Q9H169 189 aaPredicted RBP12.04□□□□□ -0.48
PRKCB-207ENST00000486868 CDC42EP4Q9H3Q1 356 aaKnown RBP12.04□□□□□ -0.48
PRKCB-207ENST00000486868 GOLGA6AQ9NYA3 693 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 DONSONQ9NYP3 566 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 DTLQ9NZJ0 730 aa12.04□□□□□ -0.48
PRKCB-207ENST00000486868 SAE1Q9UBE0 346 aaPredicted RBP12.04□□□□□ -0.48
PRKCB-207ENST00000486868 PPP1R12AO14974 1030 aaPredicted RBP12.03□□□□□ -0.48
PRKCB-207ENST00000486868 MTSS1O43312 755 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 SOD2P04179 222 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 OR4Q2P0C623 313 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 ZSCAN5DPP0CG00 497 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 LAG3P18627 525 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 MX2P20592 715 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 AMPD1P23109 780 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 YWHAQP27348 245 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 HOXC13P31276 330 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 CCR1P32246 355 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms