RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 GOLGA8JA6NMD2 632 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 TRIM38O00635 465 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 ERVPABLB-1P60509 514 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 RPS14P62263 151 aaKnown RBP16.05■□□□□ 0.16
U2AF1-211ENST00000486519 RACK1P63244 317 aaKnown RBP16.05■□□□□ 0.16
U2AF1-211ENST00000486519 TLE1Q04724 770 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 KCNA1Q09470 495 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 SRSF6Q13247 344 aaKnown RBP16.05■□□□□ 0.16
U2AF1-211ENST00000486519 CAMK2GQ13555 558 aaPredicted RBP16.05■□□□□ 0.16
U2AF1-211ENST00000486519 DHX8Q14562 1220 aaKnown RBP16.05■□□□□ 0.16
U2AF1-211ENST00000486519 KIAA0895LQ68EN5 471 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 CLEC18BQ6UXF7 455 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 Q6ZNB5 142 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 NT5DC4Q86YG4 428 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 BRSK2Q8IWQ3 736 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 CLEC18CQ8NCF0 446 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 OR5B17Q8NGF7 314 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 POMGNT1Q8WZA1 660 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 BTBD1Q9H0C5 482 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 PDE11AQ9HCR9 933 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 ELOVL2Q9NXB9 296 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 SERGEFQ9UGK8 458 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 NUDT5Q9UKK9 219 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 ITGA11Q9UKX5 1188 aa16.05■□□□□ 0.16
U2AF1-211ENST00000486519 TLN1Q9Y490 2541 aaKnown RBP16.05■□□□□ 0.16
U2AF1-211ENST00000486519 A0A1W2PPC4 97 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 FAM47DPA6NHR8 397 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 TLR5O60602 858 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 SDC3O75056 442 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 PENKP01210 267 aaPredicted RBP16.04■□□□□ 0.16
U2AF1-211ENST00000486519 LSSP48449 732 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 TUBP50607 506 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 ZNF132P52740 706 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 SLC5A3P53794 718 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 BCAT1P54687 386 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 RBP5P82980 135 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 KCNJ12Q14500 433 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 MAPRE1Q15691 268 aaKnown RBP16.04■□□□□ 0.16
U2AF1-211ENST00000486519 TMEM119Q4V9L6 283 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 SERPINA13PQ6UXR4 307 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 GPBP1Q86WP2 473 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 SPATS2Q86XZ4 545 aaKnown RBP16.04■□□□□ 0.16
U2AF1-211ENST00000486519 PDZD8Q8NEN9 1154 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 OVCA2Q8WZ82 227 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 EXTL1Q92935 676 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 PSMG3-AS1Q96PY0 264 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 NACA2Q9H009 215 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 MTG2Q9H4K7 406 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 POLR1BQ9H9Y6 1135 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 IL37Q9NZH6 218 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 MAN2B2Q9Y2E5 1009 aa16.04■□□□□ 0.16
U2AF1-211ENST00000486519 CREBBPQ92793 2442 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 SIGLEC6O43699 453 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 FAM13AO94988 1023 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 KLKB1P03952 638 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 FAM87AP0C7U9 286 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 PTPN1P18031 435 aaKnown RBP16.03■□□□□ 0.16
U2AF1-211ENST00000486519 CLN3Q13286 438 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 CCDC81Q6ZN84 652 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 PAQR9Q6ZVX9 377 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 CYB5D2Q8WUJ1 264 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 HPDLQ96IR7 371 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 CIPCQ9C0C6 399 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 GZF1Q9H116 711 aaPredicted RBP16.03■□□□□ 0.16
U2AF1-211ENST00000486519 ZHX3Q9H4I2 956 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 PARVGQ9HBI0 331 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 ODF2LQ9ULJ1 636 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 ICE1Q9Y2F5 2266 aa16.03■□□□□ 0.16
U2AF1-211ENST00000486519 NYNRINQ9P2P1 1898 aaKnown RBP16.03■□□□□ 0.16
U2AF1-211ENST00000486519 ZFC3H1O60293 1989 aaKnown RBP16.02■□□□□ 0.16
U2AF1-211ENST00000486519 CSO75390 466 aaKnown RBP16.02■□□□□ 0.16
U2AF1-211ENST00000486519 RTN3O95197 1032 aaPredicted RBP16.02■□□□□ 0.16
U2AF1-211ENST00000486519 C7P10643 843 aa16.02■□□□□ 0.16
U2AF1-211ENST00000486519 POU5F1Q01860 360 aaKnown RBP16.02■□□□□ 0.16
U2AF1-211ENST00000486519 ZSCAN23Q3MJ62 389 aa16.02■□□□□ 0.16
U2AF1-211ENST00000486519 ARL13BQ3SXY8 428 aa16.02■□□□□ 0.16
U2AF1-211ENST00000486519 SLFN12LQ6IEE8 588 aa16.02■□□□□ 0.16
U2AF1-211ENST00000486519 DPH6Q7L8W6 267 aa16.02■□□□□ 0.16
U2AF1-211ENST00000486519 PRR11Q96HE9 360 aaPredicted RBP16.02■□□□□ 0.16
U2AF1-211ENST00000486519 ELOVL4Q9GZR5 314 aa16.02■□□□□ 0.16
U2AF1-211ENST00000486519 AASDHPPTQ9NRN7 309 aa16.02■□□□□ 0.16
U2AF1-211ENST00000486519 RBAKQ9NYW8 714 aaPredicted RBP16.02■□□□□ 0.16
U2AF1-211ENST00000486519 KCND2Q9NZV8 630 aa16.02■□□□□ 0.16
U2AF1-211ENST00000486519 SATB2Q9UPW6 733 aa16.02■□□□□ 0.16
U2AF1-211ENST00000486519 FAM92AA1XBS5 289 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 BLACEA4D250 179 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 C10orf142B7Z368 130 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 BEST1O76090 585 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 CCR10P46092 362 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 NXPH1P58417 271 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 IGFBP7Q16270 282 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 C3orf38Q5JPI3 329 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 NCEH1Q6PIU2 408 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 ZC3H3Q8IXZ2 948 aaKnown RBP16.01■□□□□ 0.15
U2AF1-211ENST00000486519 ZMIZ2Q8NF64 920 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 MMS19Q96T76 1030 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 RAB34Q9BZG1 259 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 TMEM245Q9H330 911 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 NMUR1Q9HB89 426 aa16.01■□□□□ 0.15
U2AF1-211ENST00000486519 PRSS16Q9NQE7 514 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms