RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 PLEKHA7Q6IQ23 1121 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 SLC44A3Q8N4M1 653 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 KIAA1958Q8N8K9 716 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 JOSD2Q8TAC2 188 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 CSGALNACT1Q8TDX6 532 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 RXFP2Q8WXD0 754 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 IRF7Q92985 503 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 RSPRY1Q96DX4 576 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 ZFRQ96KR1 1074 aaKnown RBP11.86□□□□□ -0.51
NUP50-216ENST00000486184 CFAP57Q96MR6 1250 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 NECAB3Q96P71 396 aaPredicted RBP11.86□□□□□ -0.51
NUP50-216ENST00000486184 DDX23Q9BUQ8 820 aaKnown RBP11.86□□□□□ -0.51
NUP50-216ENST00000486184 NUP85Q9BW27 656 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 PLA2G2FQ9BZM2 168 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 DUS2Q9NX74 493 aaKnown RBP11.86□□□□□ -0.51
NUP50-216ENST00000486184 INTUQ9ULD6 942 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 NENFQ9UMX5 172 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 EPN1Q9Y6I3 576 aaPredicted RBP11.86□□□□□ -0.51
NUP50-216ENST00000486184 C2CD4BA6NLJ0 364 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 SCAMP3O14828 347 aaKnown RBP11.85□□□□□ -0.51
NUP50-216ENST00000486184 CHADO15335 359 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 RNF8O76064 485 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 LCA5LO95447 670 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 MOCS2O96007 188 aaPredicted RBP11.85□□□□□ -0.51
NUP50-216ENST00000486184 SRFP11831 508 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 PSMA2P25787 234 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 CCR1P32246 355 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 RDXP35241 583 aaKnown RBP11.85□□□□□ -0.51
NUP50-216ENST00000486184 PTPN9P43378 593 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 SLC11A2P49281 568 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 ZNF143P52747 638 aaPredicted RBP11.85□□□□□ -0.51
NUP50-216ENST00000486184 RPL7AP62424 266 aaKnown RBP11.85□□□□□ -0.51
NUP50-216ENST00000486184 PFKPQ01813 784 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 RING1Q06587 406 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 FCHO2Q0JRZ9 810 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 MTA1Q13330 715 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 KIAA1328Q86T90 577 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 DENND1CQ8IV53 801 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 LRRC8AQ8IWT6 810 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 ATP6V0D2Q8N8Y2 350 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 OSCP1Q8WVF1 389 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 KHSRPQ92945 711 aaKnown RBP eCLIP11.85□□□□□ -0.511e-7■□□□□ 8.2
NUP50-216ENST00000486184 ATP2A3Q93084 1043 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 OTUB2Q96DC9 234 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 TBCBQ99426 244 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 NPY6RQ99463 290 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 DDX50Q9BQ39 737 aaKnown RBP11.85□□□□□ -0.51
NUP50-216ENST00000486184 RPP25Q9BUL9 199 aaKnown RBP11.85□□□□□ -0.51
NUP50-216ENST00000486184 PACSIN1Q9BY11 444 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.85□□□□□ -0.51
NUP50-216ENST00000486184 UVRAGQ9P2Y5 699 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 LCMT1Q9UIC8 334 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 PCDHA13Q9Y5I0 950 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 WNT6Q9Y6F9 365 aa11.85□□□□□ -0.51
NUP50-216ENST00000486184 TCRBV5S1A1TA0A578 114 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 ARHGAP6O43182 974 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 NFATC1O95644 943 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 CYP1A2P05177 515 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 PITX1P78337 314 aaPredicted RBP11.84□□□□□ -0.51
NUP50-216ENST00000486184 ZXDBP98169 803 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 CCDC173Q0VFZ6 552 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 NR1H3Q13133 447 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 C15orf59Q2T9L4 293 aaPredicted RBP11.84□□□□□ -0.51
NUP50-216ENST00000486184 ARL13BQ3SXY8 428 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 CCDC14Q49A88 953 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 ZC3H12AQ5D1E8 599 aaKnown RBP11.84□□□□□ -0.51
NUP50-216ENST00000486184 BRMS1LQ5PSV4 323 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 PPP1R15BQ5SWA1 713 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 RAD9BQ6WBX8 426 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 HTR3DQ70Z44 454 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 STRADAQ7RTN6 431 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 TMEM139Q8IV31 216 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 RHOT2Q8IXI1 618 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 UBALD2Q8IYN6 164 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 CPA6Q8N4T0 437 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 ZNF564Q8TBZ8 553 aaPredicted RBP11.84□□□□□ -0.51
NUP50-216ENST00000486184 FAM172AQ8WUF8 416 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 DNASE1L2Q92874 299 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 ARHGEF26Q96DR7 871 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 ZFYVE19Q96K21 471 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 CNPY3Q9BT09 278 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 WDCPQ9H6R7 721 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 ANAPC7Q9UJX3 599 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 FBXL21Q9UKT6 434 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 DUSP12Q9UNI6 340 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 COL6A3P12111 3177 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 C5orf42Q9H799 3197 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 PRUNE2Q8WUY3 3088 aa11.84□□□□□ -0.51
NUP50-216ENST00000486184 MYOFQ9NZM1 2061 aa11.83□□□□□ -0.51
NUP50-216ENST00000486184 COL4A2P08572 1712 aa11.83□□□□□ -0.52
NUP50-216ENST00000486184 TYW5A2RUC4 315 aaKnown RBP11.83□□□□□ -0.52
NUP50-216ENST00000486184 TMEM191CA6NGB0 347 aa11.83□□□□□ -0.52
NUP50-216ENST00000486184 MYO1FO00160 1098 aa11.83□□□□□ -0.52
NUP50-216ENST00000486184 CCP110O43303 1012 aa11.83□□□□□ -0.52
NUP50-216ENST00000486184 LATS1O95835 1130 aa11.83□□□□□ -0.52
NUP50-216ENST00000486184 ADH1CP00326 375 aa11.83□□□□□ -0.52
NUP50-216ENST00000486184 IGLV3-25P01717 112 aa11.83□□□□□ -0.52
NUP50-216ENST00000486184 IGLV3-27P01718 113 aa11.83□□□□□ -0.52
NUP50-216ENST00000486184 CYBBP04839 570 aa11.83□□□□□ -0.52
NUP50-216ENST00000486184 CHKAP35790 457 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms