RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 EIF3CQ99613 913 aaKnown RBP20.74■□□□□ 0.91
COL6A2-208ENST00000485591 FAM83CQ9BQN1 747 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 ADAM33Q9BZ11 813 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 SLC2A4RGQ9NR83 387 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 TBC1D14Q9P2M4 693 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 INTUQ9ULD6 942 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 WNT6Q9Y6F9 365 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 EPN1Q9Y6I3 576 aaPredicted RBP20.74■□□□□ 0.91
COL6A2-208ENST00000485591 ARNTLO00327 626 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 NARSO43776 548 aaKnown RBP20.73■□□□□ 0.91
COL6A2-208ENST00000485591 TFE3P19532 575 aaPredicted RBP20.73■□□□□ 0.91
COL6A2-208ENST00000485591 CORO1AP31146 461 aaKnown RBP20.73■□□□□ 0.91
COL6A2-208ENST00000485591 IFNAR2P48551 515 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 PDGFRLQ15198 375 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 SPA17Q15506 151 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 CCDC14Q49A88 953 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 UNC45BQ8IWX7 931 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 CCDC112Q8NEF3 446 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 DNASE1L2Q92874 299 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 IRF7Q92985 503 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 OTUB2Q96DC9 234 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 ARHGEF26Q96DR7 871 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 ZFYVE19Q96K21 471 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 BRD9Q9H8M2 597 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 TRPV5Q9NQA5 729 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 DUS2Q9NX74 493 aaKnown RBP20.73■□□□□ 0.91
COL6A2-208ENST00000485591 CALCOCO1Q9P1Z2 691 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 MUTYHQ9UIF7 546 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 ZNF510Q9Y2H8 683 aa20.73■□□□□ 0.91
COL6A2-208ENST00000485591 TMEM191CA6NGB0 347 aa20.72■□□□□ 0.91
COL6A2-208ENST00000485591 SCAMP3O14828 347 aaKnown RBP20.72■□□□□ 0.91
COL6A2-208ENST00000485591 ENDOD1O94919 500 aa20.72■□□□□ 0.91
COL6A2-208ENST00000485591 IPO7O95373 1038 aaKnown RBP20.72■□□□□ 0.91
COL6A2-208ENST00000485591 LATS1O95835 1130 aa20.72■□□□□ 0.91
COL6A2-208ENST00000485591 F9P00740 461 aa20.72■□□□□ 0.91
COL6A2-208ENST00000485591 KLKB1P03952 638 aa20.72■□□□□ 0.91
COL6A2-208ENST00000485591 HARS2P49590 506 aaKnown RBP20.72■□□□□ 0.91
COL6A2-208ENST00000485591 ZNF143P52747 638 aaPredicted RBP20.72■□□□□ 0.91
COL6A2-208ENST00000485591 NME3Q13232 169 aa20.72■□□□□ 0.91
COL6A2-208ENST00000485591 LRRC8AQ8IWT6 810 aa20.72■□□□□ 0.91
COL6A2-208ENST00000485591 BBS7Q8IWZ6 715 aa20.72■□□□□ 0.91
COL6A2-208ENST00000485591 UBALD2Q8IYN6 164 aa20.72■□□□□ 0.91
COL6A2-208ENST00000485591 FNIP1Q8TF40 1166 aa20.72■□□□□ 0.91
COL6A2-208ENST00000485591 LUC7LQ9NQ29 371 aaKnown RBP20.72■□□□□ 0.91
COL6A2-208ENST00000485591 PIGVQ9NUD9 493 aa20.72■□□□□ 0.91
COL6A2-208ENST00000485591 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.72■□□□□ 0.91
COL6A2-208ENST00000485591 SYNJ2BP-COX16A0A087WUM0 186 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 SLC2A3P11169 496 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 CCR1P32246 355 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 RDXP35241 583 aaKnown RBP20.71■□□□□ 0.91
COL6A2-208ENST00000485591 MAGEA1P43355 309 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 ATP11AP98196 1134 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 PFKPQ01813 784 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 OGDHQ02218 1023 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 DEUP1Q05D60 604 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 PPP2R5DQ14738 602 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 C15orf59Q2T9L4 293 aaPredicted RBP20.71■□□□□ 0.91
COL6A2-208ENST00000485591 EML3Q32P44 896 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 STRADAQ7RTN6 431 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 DENND1CQ8IV53 801 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 CENPIQ92674 756 aaPredicted RBP20.71■□□□□ 0.91
COL6A2-208ENST00000485591 ATP2A3Q93084 1043 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 AZIN2Q96A70 460 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 CNPY3Q9BT09 278 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 NUP85Q9BW27 656 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 COX16Q9P0S2 106 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 UVRAGQ9P2Y5 699 aa20.71■□□□□ 0.91
COL6A2-208ENST00000485591 AGO1Q9UL18 857 aaKnown RBP20.71■□□□□ 0.91
COL6A2-208ENST00000485591 CCP110O43303 1012 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 APOEP02649 317 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 DESP17661 470 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 CXCR3P49682 368 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 CDO1Q16878 200 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 ZC3H12AQ5D1E8 599 aaKnown RBP20.7■□□□□ 0.9
COL6A2-208ENST00000485591 BRMS1LQ5PSV4 323 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 TRIM68Q6AZZ1 485 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 SND1Q7KZF4 910 aaKnown RBP eCLIP20.7■□□□□ 0.9
COL6A2-208ENST00000485591 FAM217AQ8IXS0 508 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 TRIM7Q9C029 511 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 LINC00597Q9H2U6 94 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 HPS4Q9NQG7 708 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 STOML2Q9UJZ1 356 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 PAXBP1Q9Y5B6 917 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 PCDHA13Q9Y5I0 950 aa20.7■□□□□ 0.9
COL6A2-208ENST00000485591 KCNU1A8MYU2 1149 aa20.69■□□□□ 0.9
COL6A2-208ENST00000485591 NFATC1O95644 943 aa20.69■□□□□ 0.9
COL6A2-208ENST00000485591 ARSAP15289 507 aa20.69■□□□□ 0.9
COL6A2-208ENST00000485591 ZNF252P-AS1Q0IIN9 211 aa20.69■□□□□ 0.9
COL6A2-208ENST00000485591 MTA1Q13330 715 aa20.69■□□□□ 0.9
COL6A2-208ENST00000485591 ZNF564Q8TBZ8 553 aaPredicted RBP20.69■□□□□ 0.9
COL6A2-208ENST00000485591 FAM172AQ8WUF8 416 aa20.69■□□□□ 0.9
COL6A2-208ENST00000485591 RNF34Q969K3 372 aa20.69■□□□□ 0.9
COL6A2-208ENST00000485591 BTN2A3PQ96KV6 586 aa20.69■□□□□ 0.9
COL6A2-208ENST00000485591 EBF3Q9H4W6 596 aa20.69■□□□□ 0.9
COL6A2-208ENST00000485591 CTTNBP2NLQ9P2B4 639 aa20.69■□□□□ 0.9
COL6A2-208ENST00000485591 KIAA1549LQ6ZVL6 1849 aa20.69■□□□□ 0.9
COL6A2-208ENST00000485591 ARHGAP6O43182 974 aa20.68■□□□□ 0.9
COL6A2-208ENST00000485591 ACSL4O60488 711 aa20.68■□□□□ 0.9
COL6A2-208ENST00000485591 PSMA2P25787 234 aa20.68■□□□□ 0.9
COL6A2-208ENST00000485591 SLC11A2P49281 568 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms