RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 TMEM196Q5HYL7 178 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 EARS2Q5JPH6 523 aaKnown RBP3.81□□□□□ -1.8
SFPQ-209ENST00000485454 FAM90A2PQ658T7 463 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 IRF2BP2Q7Z5L9 587 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 TECPR1Q7Z6L1 1165 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 TFAP2DQ7Z6R9 452 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 PIP4P1Q86T03 277 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.81□□□□□ -1.8
SFPQ-209ENST00000485454 CLASRPQ8N2M8 674 aaKnown RBP3.81□□□□□ -1.8
SFPQ-209ENST00000485454 TXLNBQ8N3L3 684 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 PJA1Q8NG27 643 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 IGFBPL1Q8WX77 278 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 OVCA2Q8WZ82 227 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 GRAMD1AQ96CP6 724 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 P2RY11Q96G91 374 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 ZFYVE19Q96K21 471 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 FCRL5Q96RD9 977 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 TM2D2Q9BX73 214 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 NAA15Q9BXJ9 866 aaKnown RBP3.81□□□□□ -1.8
SFPQ-209ENST00000485454 AGO4Q9HCK5 861 aaKnown RBP3.81□□□□□ -1.8
SFPQ-209ENST00000485454 TMEM8AQ9HCN3 771 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 HEY2Q9UBP5 337 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 MAN2B2Q9Y2E5 1009 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 SIRT4Q9Y6E7 314 aaPredicted RBP3.81□□□□□ -1.8
SFPQ-209ENST00000485454 MYMKA6NI61 221 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 C2CD4BA6NLJ0 364 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 NTN1O95631 604 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 NDST3O95803 873 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 SLC3A2P08195 630 aaKnown RBP3.8□□□□□ -1.8
SFPQ-209ENST00000485454 GSTM5P46439 218 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 VPS41P49754 854 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 POLGP54098 1239 aaPredicted RBP3.8□□□□□ -1.8
SFPQ-209ENST00000485454 FAM209BQ5JX69 171 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 CCDC144NLQ6NUI1 221 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 HIBCHQ6NVY1 386 aaPredicted RBP3.8□□□□□ -1.8
SFPQ-209ENST00000485454 C11orf96Q7Z7L8 435 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 SKAP1Q86WV1 359 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 UEVLDQ8IX04 471 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 ARFGAP1Q8N6T3 406 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 BCAS4Q8TDM0 211 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 BRI3BPQ8WY22 251 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 PIGKQ92643 395 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 AKAP1Q92667 903 aaKnown RBP eCLIP3.8□□□□□ -1.8
SFPQ-209ENST00000485454 TRMT61AQ96FX7 289 aaKnown RBP3.8□□□□□ -1.8
SFPQ-209ENST00000485454 VCPIP1Q96JH7 1222 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 GDF15Q99988 308 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 SENP7Q9BQF6 1050 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 NUDT22Q9BRQ3 303 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 TRMOQ9BU70 441 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 FOXP1Q9H334 677 aaPredicted RBP3.8□□□□□ -1.8
SFPQ-209ENST00000485454 MLXIPLQ9NP71 852 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 RGL1Q9NZL6 768 aa3.8□□□□□ -1.8
SFPQ-209ENST00000485454 PRYO14603 147 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 IKBKBO14920 756 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 KCNAB3O43448 404 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 VIPP01282 170 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 MYL3P08590 195 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 HARSP12081 509 aaKnown RBP3.79□□□□□ -1.8
SFPQ-209ENST00000485454 PECAM1P16284 738 aaPredicted RBP3.79□□□□□ -1.8
SFPQ-209ENST00000485454 RPS6KB1P23443 525 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 TNFSF4P23510 183 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 NDUFS1P28331 727 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 HOXA7P31268 230 aaPredicted RBP3.79□□□□□ -1.8
SFPQ-209ENST00000485454 HOXD12P35452 270 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 IDUAP35475 653 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 ME1P48163 572 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 SLC12A2P55011 1212 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 NSUN2Q08J23 767 aaKnown RBP eCLIP3.79□□□□□ -1.8
SFPQ-209ENST00000485454 MTA1Q13330 715 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 GAB1Q13480 694 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 PMS2P11Q13670 270 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 MAPKAPK3Q16644 382 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 ARHGAP15Q53QZ3 475 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 ACSM6Q6P461 480 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 RBM44Q6ZP01 1051 aaKnown RBP3.79□□□□□ -1.8
SFPQ-209ENST00000485454 DPP9Q86TI2 863 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 GLIS1Q8NBF1 620 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 OR52L2PQ8NGH6 319 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 MPLKIPQ8TAP9 179 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 WIPF2Q8TF74 440 aaPredicted RBP3.79□□□□□ -1.8
SFPQ-209ENST00000485454 PMM1Q92871 262 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 CELF1Q92879 486 aaKnown RBP3.79□□□□□ -1.8
SFPQ-209ENST00000485454 EIF3CQ99613 913 aaKnown RBP3.79□□□□□ -1.8
SFPQ-209ENST00000485454 SCNM1Q9BWG6 230 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 GATA5Q9BWX5 397 aaPredicted RBP3.79□□□□□ -1.8
SFPQ-209ENST00000485454 POT1Q9NUX5 634 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 ASNSD1Q9NWL6 643 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 GEMIN8Q9NWZ8 242 aaKnown RBP3.79□□□□□ -1.8
SFPQ-209ENST00000485454 HS3ST3B1Q9Y662 390 aa3.79□□□□□ -1.8
SFPQ-209ENST00000485454 CCDC187A0A096LP49 1063 aa3.78□□□□□ -1.8
SFPQ-209ENST00000485454 ANO9A1A5B4 782 aa3.78□□□□□ -1.8
SFPQ-209ENST00000485454 SLC22A23A1A5C7 686 aa3.78□□□□□ -1.8
SFPQ-209ENST00000485454 FAM234BA2RU67 622 aa3.78□□□□□ -1.8
SFPQ-209ENST00000485454 NCK2O43639 380 aa3.78□□□□□ -1.8
SFPQ-209ENST00000485454 FGF18O76093 207 aa3.78□□□□□ -1.8
SFPQ-209ENST00000485454 SRGAP2BP0DMP2 458 aa3.78□□□□□ -1.8
SFPQ-209ENST00000485454 ALADP13716 330 aa3.78□□□□□ -1.8
SFPQ-209ENST00000485454 ST6GAL1P15907 406 aa3.78□□□□□ -1.8
SFPQ-209ENST00000485454 GNALP38405 381 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms