RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 SMYD5Q6GMV2 418 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 GRAMD4Q6IC98 578 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 TOGARAM2Q6ZUX3 1019 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 ERICH1Q86X53 443 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 ETFBKMTQ8IXQ9 262 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 DEFB106AQ8N104 65 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 SERPINB11Q96P15 392 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 XPO6Q96QU8 1125 aaKnown RBP16.91■□□□□ 0.3
DDR1-246ENST00000485023 TRIM62Q9BVG3 475 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 SEPT11Q9NVA2 429 aaKnown RBP16.91■□□□□ 0.3
DDR1-246ENST00000485023 MARK1Q9P0L2 795 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 WDR35Q9P2L0 1181 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 GOLGA6L7A0A1B0GV03 622 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 GOLGA8SH3BPF8 625 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 CACNG3O60359 315 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 HSF2BPO75031 334 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 LSM8O95777 96 aaKnown RBP16.9■□□□□ 0.3
DDR1-246ENST00000485023 CDH5P33151 784 aaPredicted RBP16.9■□□□□ 0.3
DDR1-246ENST00000485023 CHKAP35790 457 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 EIF2DP41214 584 aaKnown RBP16.9■□□□□ 0.3
DDR1-246ENST00000485023 RNASE9P60153 205 aaKnown RBP16.9■□□□□ 0.3
DDR1-246ENST00000485023 FMO1Q01740 532 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 DMWDQ09019 674 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 FBXO43Q4G163 708 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 EFHC1Q5JVL4 640 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 C10orf76Q5T2E6 689 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 EMC10Q5UCC4 262 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 PHLDB2Q86SQ0 1253 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 PHTF2Q8N3S3 785 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 CCDC33Q8N5R6 958 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 DDI1Q8WTU0 396 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 FCRL2Q96LA5 508 aaPredicted RBP16.9■□□□□ 0.3
DDR1-246ENST00000485023 KIAA1549LQ6ZVL6 1849 aa16.9■□□□□ 0.3
DDR1-246ENST00000485023 TBC1D3BA6NDS4 549 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 TRUB2O95900 331 aaKnown RBP16.89■□□□□ 0.29
DDR1-246ENST00000485023 IGLV3-27P01718 113 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 CYBBP04839 570 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 TIE1P35590 1138 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 GRIA2P42262 883 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 PXNP49023 591 aaPredicted RBP16.89■□□□□ 0.29
DDR1-246ENST00000485023 DGKGP49619 791 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 SNX16P57768 344 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 SLC6A3Q01959 620 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 PPP2R5DQ14738 602 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 FAM102AQ5T9C2 384 aaPredicted RBP16.89■□□□□ 0.29
DDR1-246ENST00000485023 FYB2Q5VWT5 728 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 NUGGCQ68CJ6 796 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 RFWD3Q6PCD5 774 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 MMS22LQ6ZRQ5 1243 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 ZNF677Q86XU0 584 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 XYLT1Q86Y38 959 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 ALLCQ8N6M5 410 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 TERB1Q8NA31 727 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 SLC30A5Q8TAD4 765 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 C18orf8Q96DM3 657 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 SLC2A13Q96QE2 648 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 HHIPQ96QV1 700 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 PCDHB18PQ96TA0 734 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 TSPY26PQ9H489 355 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 DDIT4Q9NX09 232 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 SLC8A2Q9UPR5 921 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 TLR6Q9Y2C9 796 aa16.89■□□□□ 0.29
DDR1-246ENST00000485023 LRRC53A6NM62 1247 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 CHURC1-FNTBB4DL54 471 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 K7ESF4 209 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 IRAK2O43187 625 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 ATG13O75143 517 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 DAB1O75553 588 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 CAVIN2O95810 425 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 TDGF1P13385 188 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 NBL1P41271 181 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 SLC11A2P49281 568 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 FNTBP49356 437 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 SGSHP51688 502 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 UBASH3AP57075 661 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 CDK17Q00537 523 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 NME3Q13232 169 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 NR1I3Q14994 352 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 ZC3H12AQ5D1E8 599 aaKnown RBP16.88■□□□□ 0.29
DDR1-246ENST00000485023 SLC26A9Q7LBE3 791 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 UNC45BQ8IWX7 931 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 CPXM2Q8N436 756 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 MSANTD4Q8NCY6 345 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 RNF214Q8ND24 703 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 USP33Q8TEY7 942 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 BAP1Q92560 729 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 C11orf70Q9BRQ4 267 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 ASNSD1Q9NWL6 643 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 IFNKQ9P0W0 207 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 XPO7Q9UIA9 1087 aaKnown RBP16.88■□□□□ 0.29
DDR1-246ENST00000485023 CLEC4EQ9ULY5 219 aa16.88■□□□□ 0.29
DDR1-246ENST00000485023 A0A1W2PQC6 194 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 ACSL4O60488 711 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 KLF8O95600 359 aaPredicted RBP16.87■□□□□ 0.29
DDR1-246ENST00000485023 PENKP01210 267 aaPredicted RBP16.87■□□□□ 0.29
DDR1-246ENST00000485023 APOEP02649 317 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 CYP1A1P04798 512 aaPredicted RBP16.87■□□□□ 0.29
DDR1-246ENST00000485023 GLI1P08151 1106 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 FERP16591 822 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 SLC6A4P31645 630 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms