RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 BCLAF3A2AJT9 711 aaKnown RBP17.32■□□□□ 0.36
CTSA-207ENST00000484855 RBL1P28749 1068 aa17.32■□□□□ 0.36
CTSA-207ENST00000484855 ACTN2P35609 894 aa17.32■□□□□ 0.36
CTSA-207ENST00000484855 IKBKEQ14164 716 aa17.32■□□□□ 0.36
CTSA-207ENST00000484855 BEND5Q7L4P6 421 aa17.32■□□□□ 0.36
CTSA-207ENST00000484855 DQX1Q8TE96 717 aaKnown RBP17.32■□□□□ 0.36
CTSA-207ENST00000484855 PKNOX2Q96KN3 472 aa17.32■□□□□ 0.36
CTSA-207ENST00000484855 ETNK2Q9NVF9 386 aa17.32■□□□□ 0.36
CTSA-207ENST00000484855 EEF2KO00418 725 aaKnown RBP17.31■□□□□ 0.36
CTSA-207ENST00000484855 TTC4O95801 387 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 CLTBP09497 229 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 CPB1P15086 417 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 NRLP54845 237 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 ARPP19P56211 112 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 XRCC4Q13426 336 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 BTBD8Q5XKL5 378 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 FBXO46Q6PJ61 603 aaPredicted RBP17.31■□□□□ 0.36
CTSA-207ENST00000484855 TMEM173Q86WV6 379 aaPredicted RBP17.31■□□□□ 0.36
CTSA-207ENST00000484855 RELL1Q8IUW5 271 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 TAB3Q8N5C8 712 aaPredicted RBP17.31■□□□□ 0.36
CTSA-207ENST00000484855 CPT1BQ92523 772 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 WDCPQ9H6R7 721 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 USP29Q9HBJ7 922 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 LRRC4CQ9HCJ2 640 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 PRDM10Q9NQV6 1147 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 ABCC13Q9NSE7 274 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 NINJ2Q9NZG7 142 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 BCCIPQ9P287 314 aaKnown RBP eCLIP17.31■□□□□ 0.36
CTSA-207ENST00000484855 GREB1Q4ZG55 1949 aa17.31■□□□□ 0.36
CTSA-207ENST00000484855 MAGEA11P43364 429 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 BASP1P80723 227 aaKnown RBP17.3■□□□□ 0.36
CTSA-207ENST00000484855 SLC10A2Q12908 348 aaPredicted RBP17.3■□□□□ 0.36
CTSA-207ENST00000484855 KYNUQ16719 465 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 DDR2Q16832 855 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 AGBL2Q5U5Z8 902 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 SDHAF4Q5VUM1 108 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 RTP4Q96DX8 246 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 C8orf48Q96LL4 319 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 SAYSD1Q9NPB0 183 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 ANLNQ9NQW6 1124 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 DTLQ9NZJ0 730 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 PAK5Q9P286 719 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 MFHAS1Q9Y4C4 1052 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 H7C4K7 107 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 CXCR3P49682 368 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 GPR15P49685 360 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 SLC45A4Q5BKX6 768 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 RTP2Q5QGT7 225 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 ANKRD22Q5VYY1 191 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 RFX8Q6ZV50 586 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 NUP93Q8N1F7 819 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 NAT8LQ8N9F0 302 aa17.3■□□□□ 0.36
CTSA-207ENST00000484855 BCL7CQ8WUZ0 217 aaPredicted RBP17.3■□□□□ 0.36
CTSA-207ENST00000484855 QKIQ96PU8 341 aaKnown RBP eCLIP17.3■□□□□ 0.36
CTSA-207ENST00000484855 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.29■□□□□ 0.36
CTSA-207ENST00000484855 GOLGA8MH3BSY2 632 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 I6L893 689 aaPredicted RBP17.29■□□□□ 0.36
CTSA-207ENST00000484855 MFSD11O43934 449 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 RFC2P35250 354 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 MAGEA4P43358 317 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 DPYSQ14117 519 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 DNAJC21Q5F1R6 531 aaKnown RBP17.29■□□□□ 0.36
CTSA-207ENST00000484855 KCNT2Q6UVM3 1135 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 BZW1Q7L1Q6 419 aaKnown RBP17.29■□□□□ 0.36
CTSA-207ENST00000484855 CROCCP2Q86T23 111 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 ATAD1Q8NBU5 361 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 STKLD1Q8NE28 680 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 LRRN4Q8WUT4 740 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 RNF34Q969K3 372 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 C9orf72Q96LT7 481 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 TTPALQ9BTX7 342 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 TKTL2Q9H0I9 626 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 COL4A6Q14031 1691 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 SMAPO00193 183 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 IGLV3-25P01717 112 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 AMHP03971 560 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 GJA8P48165 433 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 TPI1P60174 286 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 SEMA3BQ13214 749 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 HIF1AQ16665 826 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 ANKS3Q6ZW76 656 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 CENPUQ71F23 418 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 CCDC33Q8N5R6 958 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 TTC9BQ8N6N2 239 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 ANKLE1Q8NAG6 615 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 ARMC5Q96C12 935 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 OLFM3Q96PB7 478 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 TMEM109Q9BVC6 243 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 FBXO44Q9H4M3 255 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 C11orf49Q9H6J7 331 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 SCML2Q9UQR0 700 aa17.29■□□□□ 0.36
CTSA-207ENST00000484855 A0A1W2PQH9 124 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 MTMR11A4FU01 709 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 SMIM23A6NLE4 172 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 FAM72CH0Y354 149 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 IRAK2O43187 625 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 NR1D1P20393 614 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 ALDH7A1P49419 539 aaKnown RBP17.28■□□□□ 0.36
CTSA-207ENST00000484855 SKIDA1Q1XH10 827 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 FAM72AQ5TYM5 149 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms