RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 FAM92AA1XBS5 289 aa27.21■■□□□ 1.95
SHOX2-204ENST00000483851 MTMR11A4FU01 709 aa27.21■■□□□ 1.95
SHOX2-204ENST00000483851 RTN3O95197 1032 aaPredicted RBP27.21■■□□□ 1.95
SHOX2-204ENST00000483851 ITGA8P53708 1063 aa27.21■■□□□ 1.95
SHOX2-204ENST00000483851 ROR1Q01973 937 aa27.21■■□□□ 1.95
SHOX2-204ENST00000483851 EIF4EBP2Q13542 120 aaPredicted RBP27.21■■□□□ 1.95
SHOX2-204ENST00000483851 PCGF5Q86SE9 256 aa27.21■■□□□ 1.95
SHOX2-204ENST00000483851 EDEM1Q92611 657 aa27.21■■□□□ 1.95
SHOX2-204ENST00000483851 PRDM5Q9NQX1 630 aaPredicted RBP27.21■■□□□ 1.95
SHOX2-204ENST00000483851 DNALI1O14645 258 aaPredicted RBP27.2■■□□□ 1.94
SHOX2-204ENST00000483851 RARGP13631 454 aa27.2■■□□□ 1.94
SHOX2-204ENST00000483851 ITGB8P26012 769 aa27.2■■□□□ 1.94
SHOX2-204ENST00000483851 PBX3P40426 434 aa27.2■■□□□ 1.94
SHOX2-204ENST00000483851 KCTD19Q17RG1 926 aaPredicted RBP27.2■■□□□ 1.94
SHOX2-204ENST00000483851 IZUMO3Q5VZ72 239 aa27.2■■□□□ 1.94
SHOX2-204ENST00000483851 HIBCHQ6NVY1 386 aaPredicted RBP27.2■■□□□ 1.94
SHOX2-204ENST00000483851 KCNT2Q6UVM3 1135 aa27.2■■□□□ 1.94
SHOX2-204ENST00000483851 LEKR1Q6ZMV7 388 aa27.2■■□□□ 1.94
SHOX2-204ENST00000483851 DQX1Q8TE96 717 aaKnown RBP27.2■■□□□ 1.94
SHOX2-204ENST00000483851 B3GALT6Q96L58 329 aa27.2■■□□□ 1.94
SHOX2-204ENST00000483851 WDCPQ9H6R7 721 aa27.2■■□□□ 1.94
SHOX2-204ENST00000483851 SMAPO00193 183 aa27.19■■□□□ 1.94
SHOX2-204ENST00000483851 WDR5P61964 334 aaKnown RBP27.19■■□□□ 1.94
SHOX2-204ENST00000483851 P3H1Q32P28 736 aa27.19■■□□□ 1.94
SHOX2-204ENST00000483851 ATAD1Q8NBU5 361 aa27.19■■□□□ 1.94
SHOX2-204ENST00000483851 RNF139Q8WU17 664 aa27.19■■□□□ 1.94
SHOX2-204ENST00000483851 ZNF558Q96NG5 402 aa27.19■■□□□ 1.94
SHOX2-204ENST00000483851 PABPC3Q9H361 631 aaKnown RBP27.19■■□□□ 1.94
SHOX2-204ENST00000483851 SMOC2Q9H3U7 446 aa27.19■■□□□ 1.94
SHOX2-204ENST00000483851 KIAA0100Q14667 2235 aaKnown RBP27.19■■□□□ 1.94
SHOX2-204ENST00000483851 SYNJ2BP-COX16A0A087WUM0 186 aa27.19■■□□□ 1.94
SHOX2-204ENST00000483851 BCLAF3A2AJT9 711 aaKnown RBP27.19■■□□□ 1.94
SHOX2-204ENST00000483851 ZNF189O75820 626 aaPredicted RBP27.19■■□□□ 1.94
SHOX2-204ENST00000483851 HAPLN1P10915 354 aaPredicted RBP27.19■■□□□ 1.94
SHOX2-204ENST00000483851 PMS2P54278 862 aa27.19■■□□□ 1.94
SHOX2-204ENST00000483851 RPL10AP62906 217 aaKnown RBP27.19■■□□□ 1.94
SHOX2-204ENST00000483851 BRMS1LQ5PSV4 323 aa27.19■■□□□ 1.94
SHOX2-204ENST00000483851 DARS2Q6PI48 645 aaKnown RBP27.19■■□□□ 1.94
SHOX2-204ENST00000483851 RTP4Q96DX8 246 aa27.19■■□□□ 1.94
SHOX2-204ENST00000483851 COX16Q9P0S2 106 aa27.19■■□□□ 1.94
SHOX2-204ENST00000483851 TPX2Q9ULW0 747 aaKnown RBP27.19■■□□□ 1.94
SHOX2-204ENST00000483851 ATP8A1Q9Y2Q0 1164 aa27.19■■□□□ 1.94
SHOX2-204ENST00000483851 GOT1P17174 413 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 LAG3P18627 525 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 PSEN1P49768 467 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 GPS1Q13098 491 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 SEMA3BQ13214 749 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 MORF4L2Q15014 288 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 DDR2Q16832 855 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 C1orf228Q6PIY5 440 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 NPNTQ6UXI9 565 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 TAS1R1Q7RTX1 841 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 SCD5Q86SK9 330 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 TAC4Q86UU9 113 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 FBXO22Q8NEZ5 403 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 PGLYRP2Q96PD5 576 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 TMBIM4Q9HC24 238 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 HSFX1Q9UBD0 423 aa27.18■■□□□ 1.94
SHOX2-204ENST00000483851 VPS41P49754 854 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 RSPO2Q6UXX9 243 aaPredicted RBP27.17■■□□□ 1.94
SHOX2-204ENST00000483851 DENND5BQ6ZUT9 1274 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 TRMT10CQ7L0Y3 403 aaKnown RBP27.17■■□□□ 1.94
SHOX2-204ENST00000483851 CDKL3Q8IVW4 592 aaPredicted RBP27.17■■□□□ 1.94
SHOX2-204ENST00000483851 SLC39A11Q8N1S5 342 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 GLIS1Q8NBF1 620 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 ADAM32Q8TC27 787 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 UBLCP1Q8WVY7 318 aaPredicted RBP27.17■■□□□ 1.94
SHOX2-204ENST00000483851 ATP6V1G3Q96LB4 118 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 IL23AQ9NPF7 189 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 MYO16Q9Y6X6 1858 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 H7C0C1 242 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 IRAK2O43187 625 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 IFNB1P01574 187 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 SOD2P04179 222 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 ATP5OP48047 213 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 EIF3BP55884 814 aaKnown RBP27.17■■□□□ 1.94
SHOX2-204ENST00000483851 MSANTD2Q6P1R3 559 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 C4orf22Q6V702 233 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 RNF19BQ6ZMZ0 732 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 RELL1Q8IUW5 271 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 PYROXD2Q8N2H3 581 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 ADAM7Q9H2U9 754 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 ARHGEF4Q9NR80 690 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 STK39Q9UEW8 545 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 SHOC2Q9UQ13 582 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 HEY1Q9Y5J3 304 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 RAD54BQ9Y620 910 aa27.17■■□□□ 1.94
SHOX2-204ENST00000483851 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP27.16■■□□□ 1.94
SHOX2-204ENST00000483851 IRAK1P51617 712 aa27.16■■□□□ 1.94
SHOX2-204ENST00000483851 ARPP19P56211 112 aa27.16■■□□□ 1.94
SHOX2-204ENST00000483851 DEFB103AP81534 67 aa27.16■■□□□ 1.94
SHOX2-204ENST00000483851 PSMD5Q16401 504 aa27.16■■□□□ 1.94
SHOX2-204ENST00000483851 SPOUT1Q5T280 376 aaKnown RBP27.16■■□□□ 1.94
SHOX2-204ENST00000483851 NCBP2-AS2Q69YL0 99 aa27.16■■□□□ 1.94
SHOX2-204ENST00000483851 UNC45BQ8IWX7 931 aa27.16■■□□□ 1.94
SHOX2-204ENST00000483851 SH2D3CQ8N5H7 860 aa27.16■■□□□ 1.94
SHOX2-204ENST00000483851 OSBPL2Q9H1P3 480 aa27.16■■□□□ 1.94
SHOX2-204ENST00000483851 CLIC5Q9NZA1 410 aa27.16■■□□□ 1.94
SHOX2-204ENST00000483851 CDY1Q9Y6F8 540 aa27.16■■□□□ 1.94
SHOX2-204ENST00000483851 HACD1B0YJ81 288 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms