RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 H3BRJ5 948 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 AMHP03971 560 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 NUDT17P0C025 328 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 HAPLN1P10915 354 aaPredicted RBP14.56□□□□□ -0.08
CLK3-204ENST00000483723 CSF2RAP15509 400 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 VPS41P49754 854 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 PGFP49763 221 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 GPS1Q13098 491 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 DPYSQ14117 519 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 DDR2Q16832 855 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 USP41Q3LFD5 358 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 EFHC2Q5JST6 749 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 RNASEH2BQ5TBB1 312 aaKnown RBP14.56□□□□□ -0.08
CLK3-204ENST00000483723 BTBD8Q5XKL5 378 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 NCBP2-AS2Q69YL0 99 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 SLC8B1Q6J4K2 584 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 TAC4Q86UU9 113 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 ADAM32Q8TC27 787 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 RNF139Q8WU17 664 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 RIN2Q8WYP3 895 aaPredicted RBP14.56□□□□□ -0.08
CLK3-204ENST00000483723 PKNOX2Q96KN3 472 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 WDCPQ9H6R7 721 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 C10orf88Q9H8K7 445 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 NMUR1Q9HB89 426 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 ARHGEF4Q9NR80 690 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 FARP1Q9Y4F1 1045 aaPredicted RBP14.56□□□□□ -0.08
CLK3-204ENST00000483723 ZNF638Q14966 1978 aaKnown RBP14.56□□□□□ -0.08
CLK3-204ENST00000483723 MYO16Q9Y6X6 1858 aa14.56□□□□□ -0.08
CLK3-204ENST00000483723 SYNJ2BP-COX16A0A087WUM0 186 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 CHKAP35790 457 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 GPR15P49685 360 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 ROR1Q01973 937 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 MORF4L2Q15014 288 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 PAFAH1B3Q15102 231 aaKnown RBP14.55□□□□□ -0.08
CLK3-204ENST00000483723 ARL13BQ3SXY8 428 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 MSANTD2Q6P1R3 559 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 DARS2Q6PI48 645 aaKnown RBP14.55□□□□□ -0.08
CLK3-204ENST00000483723 KCNT2Q6UVM3 1135 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 RNF19BQ6ZMZ0 732 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 TRMT10CQ7L0Y3 403 aaKnown RBP14.55□□□□□ -0.08
CLK3-204ENST00000483723 PCGF5Q86SE9 256 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 ZC3H18Q86VM9 953 aaKnown RBP14.55□□□□□ -0.08
CLK3-204ENST00000483723 CMTR2Q8IYT2 770 aaKnown RBP14.55□□□□□ -0.08
CLK3-204ENST00000483723 SLC39A11Q8N1S5 342 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 ZCCHC9Q8N567 271 aaKnown RBP14.55□□□□□ -0.08
CLK3-204ENST00000483723 TTC9BQ8N6N2 239 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 UBLCP1Q8WVY7 318 aaPredicted RBP14.55□□□□□ -0.08
CLK3-204ENST00000483723 CEP295NLQ96MC4 621 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 PGLYRP2Q96PD5 576 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 OSBPL2Q9H1P3 480 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 CRISPLD1Q9H336 500 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 SEMA4AQ9H3S1 761 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 SMOC2Q9H3U7 446 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 FAM204AQ9H8W3 233 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 ARHGEF38Q9NXL2 777 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 COX16Q9P0S2 106 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 CARNS1A5YM72 827 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 GOLGA8KD6RF30 607 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 H7C0C1 242 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 DCLK1O15075 740 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 IRAK2O43187 625 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 BAIAP3O94812 1187 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 IFNB1P01574 187 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 RAG1P15918 1043 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 ATP5OP48047 213 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 WDR5P61964 334 aaKnown RBP14.55□□□□□ -0.08
CLK3-204ENST00000483723 FAM193AP78312 1265 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 DEFB103AP81534 67 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 GBE1Q04446 702 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 CBLBQ13191 982 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 PRSS55Q6UWB4 352 aaPredicted RBP14.55□□□□□ -0.08
CLK3-204ENST00000483723 BZW1Q7L1Q6 419 aaKnown RBP14.55□□□□□ -0.08
CLK3-204ENST00000483723 ARHGAP18Q8N392 663 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 TMEM199Q8N511 208 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 FAM71DQ8N9W8 422 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 FBXO22Q8NEZ5 403 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 OLFM3Q96PB7 478 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 TMEM106CQ9BVX2 250 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 ETNK2Q9NVF9 386 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 DTLQ9NZJ0 730 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 HEY1Q9Y5J3 304 aa14.55□□□□□ -0.08
CLK3-204ENST00000483723 A0A1W2PQH9 124 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 CCDC85CA6NKD9 419 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 HACD1B0YJ81 288 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 FAM72CH0Y354 149 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 SMAPO00193 183 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 RTN3O95197 1032 aaPredicted RBP14.54□□□□□ -0.08
CLK3-204ENST00000483723 CPB1P15086 417 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 EIF3BP55884 814 aaKnown RBP14.54□□□□□ -0.08
CLK3-204ENST00000483723 USP46P62068 366 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 BRMS1LQ5PSV4 323 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 FAM72AQ5TYM5 149 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 SDHAF4Q5VUM1 108 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 FAM72DQ6L9T8 149 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 CEP128Q6ZU80 1094 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 RFX8Q6ZV50 586 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 UBE2Q1Q7Z7E8 422 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 FAM72BQ86X60 149 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 RUFY1Q96T51 708 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 TMEM109Q9BVC6 243 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms