RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 CPA6Q8N4T0 437 aa10.05□□□□□ -0.8
HMG20B-210ENST00000483417 PDZD8Q8NEN9 1154 aa10.05□□□□□ -0.8
HMG20B-210ENST00000483417 EDEM1Q92611 657 aa10.05□□□□□ -0.8
HMG20B-210ENST00000483417 ATP2A3Q93084 1043 aa10.05□□□□□ -0.8
HMG20B-210ENST00000483417 SLITRK1Q96PX8 696 aa10.05□□□□□ -0.8
HMG20B-210ENST00000483417 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.05□□□□□ -0.8
HMG20B-210ENST00000483417 ADAM33Q9BZ11 813 aa10.05□□□□□ -0.8
HMG20B-210ENST00000483417 RAB6CQ9H0N0 254 aa10.05□□□□□ -0.8
HMG20B-210ENST00000483417 PNPLA8Q9NP80 782 aa10.05□□□□□ -0.8
HMG20B-210ENST00000483417 SMG5Q9UPR3 1016 aaKnown RBP10.05□□□□□ -0.8
HMG20B-210ENST00000483417 NAALADL1Q9UQQ1 740 aa10.05□□□□□ -0.8
HMG20B-210ENST00000483417 CPQQ9Y646 472 aa10.05□□□□□ -0.8
HMG20B-210ENST00000483417 DCHS1Q96JQ0 3298 aa10.05□□□□□ -0.8
HMG20B-210ENST00000483417 A0A0A0MRY4 1105 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 CCDC163A0A0D9SF12 145 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 TCRBV5S1A1TA0A578 114 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 ANTXRLA6NF34 631 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 K7EQS6 105 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 GREM1O60565 184 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 ATG13O75143 517 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 RNF40O75150 1001 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 RARGP13631 454 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 TFE3P19532 575 aaPredicted RBP10.04□□□□□ -0.8
HMG20B-210ENST00000483417 MMP8P22894 467 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 CNR2P34972 360 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 GABRB2P47870 512 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 TUBP50607 506 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 SLC8A3P57103 927 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 RNASE9P60153 205 aaKnown RBP10.04□□□□□ -0.8
HMG20B-210ENST00000483417 YWHAGP61981 247 aaKnown RBP eCLIP10.04□□□□□ -0.8
HMG20B-210ENST00000483417 GFPT1Q06210 699 aaPredicted RBP10.04□□□□□ -0.8
HMG20B-210ENST00000483417 SRSF5Q13243 272 aaKnown RBP10.04□□□□□ -0.8
HMG20B-210ENST00000483417 TRIM14Q14142 442 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 FBXO43Q4G163 708 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 HECTD3Q5T447 861 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 RHBDF2Q6PJF5 856 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 WDR5BQ86VZ2 330 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 TMEM139Q8IV31 216 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 KIAA2013Q8IYS2 634 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 MCOLN2Q8IZK6 566 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 CD101Q93033 1021 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 RMDN1Q96DB5 314 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 C18orf8Q96DM3 657 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 IQCDQ96DY2 449 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 C11orf70Q9BRQ4 267 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 NUCKS1Q9H1E3 243 aaKnown RBP10.04□□□□□ -0.8
HMG20B-210ENST00000483417 FBXO44Q9H4M3 255 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 NHEJ1Q9H9Q4 299 aaPredicted RBP10.04□□□□□ -0.8
HMG20B-210ENST00000483417 CNGB3Q9NQW8 809 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 SPTLC3Q9NUV7 552 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 POLR3BQ9NW08 1133 aaPredicted RBP10.04□□□□□ -0.8
HMG20B-210ENST00000483417 SMPD4Q9NXE4 827 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 CALCOCO1Q9P1Z2 691 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 SFMBT1Q9UHJ3 866 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 NAGPAQ9UK23 515 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 NENFQ9UMX5 172 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 TFR2Q9UP52 801 aa10.04□□□□□ -0.8
HMG20B-210ENST00000483417 E2F8A0AVK6 867 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 GOLGA8SH3BPF8 625 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 SCAMP3O14828 347 aaKnown RBP10.03□□□□□ -0.8
HMG20B-210ENST00000483417 NFATC1O95644 943 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 CYP17A1P05093 508 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 CCDC172P0C7W6 258 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 RRM1P23921 792 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 ACADSBP45954 432 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 ID4P47928 161 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 SLC6A11P48066 632 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 SLC6A3Q01959 620 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 CENPCQ03188 943 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 NR1H3Q13133 447 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 MAPK8IP2Q13387 824 aaPredicted RBP10.03□□□□□ -0.8
HMG20B-210ENST00000483417 DHCR24Q15392 516 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 TDRD12Q587J7 1177 aaKnown RBP10.03□□□□□ -0.8
HMG20B-210ENST00000483417 CCDC122Q5T0U0 273 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 HEATR6Q6AI08 1181 aaKnown RBP10.03□□□□□ -0.8
HMG20B-210ENST00000483417 OLFML1Q6UWY5 402 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 RAD9BQ6WBX8 426 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 SYT13Q7L8C5 426 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 PHF13Q86YI8 300 aaPredicted RBP10.03□□□□□ -0.8
HMG20B-210ENST00000483417 DEFB106AQ8N104 65 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 SIX6OS1Q8N1H7 587 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 CAMKK1Q8N5S9 505 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 TTC16Q8NEE8 873 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 JOSD2Q8TAC2 188 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 ZNF830Q96NB3 372 aaPredicted RBP10.03□□□□□ -0.8
HMG20B-210ENST00000483417 PACSIN1Q9BY11 444 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 ISCUQ9H1K1 167 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 PARD6AQ9NPB6 346 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.03□□□□□ -0.82e-7■□□□□ 8.4
HMG20B-210ENST00000483417 DLL3Q9NYJ7 618 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 ADAM22Q9P0K1 906 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 CFAP97Q9P2B7 532 aa10.03□□□□□ -0.8
HMG20B-210ENST00000483417 BZW2Q9Y6E2 419 aaKnown RBP10.03□□□□□ -0.8
HMG20B-210ENST00000483417 HELZP42694 1942 aaKnown RBP10.03□□□□□ -0.8
HMG20B-210ENST00000483417 PTPRZ1P23471 2315 aaPredicted RBP10.02□□□□□ -0.8
HMG20B-210ENST00000483417 FRYLO94915 3013 aa10.02□□□□□ -0.8
HMG20B-210ENST00000483417 FAM186AA6NE01 2351 aa10.02□□□□□ -0.8
HMG20B-210ENST00000483417 A0A0U1RQJ8 604 aa10.02□□□□□ -0.81
HMG20B-210ENST00000483417 SOWAHDA6NJG2 315 aa10.02□□□□□ -0.81
HMG20B-210ENST00000483417 SLC9A3R1O14745 358 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms