RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 PIGVQ9NUD9 493 aa18.57■□□□□ 0.56
CPNE1-224ENST00000483359 LSM7Q9UK45 103 aaKnown RBP18.57■□□□□ 0.56
CPNE1-224ENST00000483359 REXO2Q9Y3B8 237 aaKnown RBP18.57■□□□□ 0.56
CPNE1-224ENST00000483359 HBS1LQ9Y450 684 aaKnown RBP18.57■□□□□ 0.56
CPNE1-224ENST00000483359 MYO10Q9HD67 2058 aa18.56■□□□□ 0.56
CPNE1-224ENST00000483359 CCP110O43303 1012 aa18.56■□□□□ 0.56
CPNE1-224ENST00000483359 KLKB1P03952 638 aa18.56■□□□□ 0.56
CPNE1-224ENST00000483359 GBP1P32455 592 aa18.56■□□□□ 0.56
CPNE1-224ENST00000483359 CCZ1BP86790 482 aa18.56■□□□□ 0.56
CPNE1-224ENST00000483359 CCZ1P86791 482 aaPredicted RBP18.56■□□□□ 0.56
CPNE1-224ENST00000483359 DEUP1Q05D60 604 aa18.56■□□□□ 0.56
CPNE1-224ENST00000483359 FCHO2Q0JRZ9 810 aa18.56■□□□□ 0.56
CPNE1-224ENST00000483359 ZC3H12AQ5D1E8 599 aaKnown RBP18.56■□□□□ 0.56
CPNE1-224ENST00000483359 BBS7Q8IWZ6 715 aa18.56■□□□□ 0.56
CPNE1-224ENST00000483359 PLD4Q96BZ4 506 aa18.56■□□□□ 0.56
CPNE1-224ENST00000483359 OSGEPQ9NPF4 335 aa18.56■□□□□ 0.56
CPNE1-224ENST00000483359 MUTYHQ9UIF7 546 aa18.56■□□□□ 0.56
CPNE1-224ENST00000483359 ANAPC7Q9UJX3 599 aa18.56■□□□□ 0.56
CPNE1-224ENST00000483359 TLR6Q9Y2C9 796 aa18.56■□□□□ 0.56
CPNE1-224ENST00000483359 GREM1O60565 184 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 PSMA2P25787 234 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 TNK2Q07912 1038 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 TTC8Q8TAM2 541 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 ZNF564Q8TBZ8 553 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-224ENST00000483359 FAM172AQ8WUF8 416 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 NT5C3BQ969T7 300 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 NXPE3Q969Y0 559 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 FCRL2Q96LA5 508 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-224ENST00000483359 ZNF830Q96NB3 372 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-224ENST00000483359 LINC00597Q9H2U6 94 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 EBF3Q9H4W6 596 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 BRD9Q9H8M2 597 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 THG1LQ9NWX6 298 aaKnown RBP18.55■□□□□ 0.56
CPNE1-224ENST00000483359 DUS2Q9NX74 493 aaKnown RBP18.55■□□□□ 0.56
CPNE1-224ENST00000483359 RRN3Q9NYV6 651 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 TMEM191CA6NGB0 347 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 TCF3P15923 654 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 HARS2P49590 506 aaKnown RBP18.55■□□□□ 0.56
CPNE1-224ENST00000483359 ZNF143P52747 638 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-224ENST00000483359 VCPP55072 806 aaKnown RBP18.55■□□□□ 0.56
CPNE1-224ENST00000483359 ZNF252P-AS1Q0IIN9 211 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 TDGQ13569 410 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 C10orf76Q5T2E6 689 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 DAB2IPQ5VWQ8 1189 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 FAM131BQ86XD5 332 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 OSCP1Q8WVF1 389 aa18.55■□□□□ 0.56
CPNE1-224ENST00000483359 TRIOO75962 3097 aa18.54■□□□□ 0.56
CPNE1-224ENST00000483359 KIF26AQ9ULI4 1882 aaPredicted RBP18.54■□□□□ 0.56
CPNE1-224ENST00000483359 E2F8A0AVK6 867 aa18.54■□□□□ 0.56
CPNE1-224ENST00000483359 ARHGAP6O43182 974 aa18.54■□□□□ 0.56
CPNE1-224ENST00000483359 IGLV3-27P01718 113 aa18.54■□□□□ 0.56
CPNE1-224ENST00000483359 APOEP02649 317 aa18.54■□□□□ 0.56
CPNE1-224ENST00000483359 RDXP35241 583 aaKnown RBP18.54■□□□□ 0.56
CPNE1-224ENST00000483359 PTPN9P43378 593 aa18.54■□□□□ 0.56
CPNE1-224ENST00000483359 IFNAR2P48551 515 aa18.54■□□□□ 0.56
CPNE1-224ENST00000483359 KPNA1P52294 538 aaPredicted RBP18.54■□□□□ 0.56
CPNE1-224ENST00000483359 CCDC173Q0VFZ6 552 aa18.54■□□□□ 0.56
CPNE1-224ENST00000483359 NNTQ13423 1086 aa18.54■□□□□ 0.56
CPNE1-224ENST00000483359 SLC39A13Q96H72 371 aa18.54■□□□□ 0.56
CPNE1-224ENST00000483359 LUC7LQ9NQ29 371 aaKnown RBP18.54■□□□□ 0.56
CPNE1-224ENST00000483359 XPO7Q9UIA9 1087 aaKnown RBP18.54■□□□□ 0.56
CPNE1-224ENST00000483359 AGO1Q9UL18 857 aaKnown RBP18.54■□□□□ 0.56
CPNE1-224ENST00000483359 SORCS3Q9UPU3 1222 aa18.54■□□□□ 0.56
CPNE1-224ENST00000483359 RCCD1A6NED2 376 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 NRDCO43847 1150 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 ARSAP15289 507 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 CCR1P32246 355 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 EIF4EBP2Q13542 120 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-224ENST00000483359 ARHGAP29Q52LW3 1261 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 NUGGCQ68CJ6 796 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 SND1Q7KZF4 910 aaKnown RBP eCLIP18.53■□□□□ 0.56
CPNE1-224ENST00000483359 KIAA1328Q86T90 577 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 SLC35G2Q8TBE7 412 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 CNPY3Q9BT09 278 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 TMPRSS4Q9NRS4 437 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 GTSE1Q9NYZ3 720 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 A0A0U1RQJ8 604 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 GGCXP38435 758 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 HDAC4P56524 1084 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 RING1Q06587 406 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 Q6ZNB5 142 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 HTR3DQ70Z44 454 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 ATRIPQ8WXE1 791 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 RFFLQ8WZ73 363 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 PGAP3Q96FM1 320 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-224ENST00000483359 WDCPQ9H6R7 721 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 INTUQ9ULD6 942 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 TICRRQ7Z2Z1 1910 aa18.53■□□□□ 0.56
CPNE1-224ENST00000483359 CHADO15335 359 aa18.52■□□□□ 0.56
CPNE1-224ENST00000483359 KRT83P78385 493 aa18.52■□□□□ 0.56
CPNE1-224ENST00000483359 EML3Q32P44 896 aa18.52■□□□□ 0.56
CPNE1-224ENST00000483359 SCYL2Q6P3W7 929 aa18.52■□□□□ 0.56
CPNE1-224ENST00000483359 BNIPLQ7Z465 357 aa18.52■□□□□ 0.56
CPNE1-224ENST00000483359 UNC45BQ8IWX7 931 aa18.52■□□□□ 0.56
CPNE1-224ENST00000483359 BHMTQ93088 406 aa18.52■□□□□ 0.56
CPNE1-224ENST00000483359 FAM83CQ9BQN1 747 aa18.52■□□□□ 0.56
CPNE1-224ENST00000483359 TKTL2Q9H0I9 626 aa18.52■□□□□ 0.56
CPNE1-224ENST00000483359 KCNF1Q9H3M0 494 aa18.52■□□□□ 0.56
CPNE1-224ENST00000483359 HPS4Q9NQG7 708 aa18.52■□□□□ 0.56
CPNE1-224ENST00000483359 ANLNQ9NQW6 1124 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms