RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 UNC45BQ8IWX7 931 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 KIAA2013Q8IYS2 634 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 ANKRD20A12PQ8NF67 263 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 DDI1Q8WTU0 396 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 LSM14BQ9BX40 385 aaKnown RBP14.48□□□□□ -0.09
VARS-225ENST00000482996 PCDHGC3Q9UN70 934 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 STARD13Q9Y3M8 1113 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 CEP83Q9Y592 693 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 CEP250Q9BV73 2442 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 ANTXRLA6NF34 631 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 E5RJQ4 531 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 SGK1O00141 431 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 CISD3P0C7P0 127 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 CHRM1P11229 460 aaPredicted RBP14.47□□□□□ -0.09
VARS-225ENST00000482996 NTSR1P30989 418 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 SLC11A2P49281 568 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 TBX4P57082 545 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 RING1Q06587 406 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 PDCLQ13371 301 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 E2F5Q15329 346 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 MPPE1Q53F39 396 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 USP39Q53GS9 565 aaKnown RBP14.47□□□□□ -0.09
VARS-225ENST00000482996 FKBP15Q5T1M5 1219 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 KLHDC7AQ5VTJ3 777 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 CDKAL1Q5VV42 579 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 TOGARAM2Q6ZUX3 1019 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 BEND5Q7L4P6 421 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 FAM217AQ8IXS0 508 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 FAM71AQ8IYT1 594 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 SERPINB11Q96P15 392 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 SLC2A11Q9BYW1 496 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 LHX5Q9H2C1 402 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 BCCIPQ9P287 314 aaKnown RBP eCLIP14.47□□□□□ -0.09
VARS-225ENST00000482996 FBXO10Q9UK96 956 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 AJAP1Q9UKB5 411 aaPredicted RBP14.47□□□□□ -0.09
VARS-225ENST00000482996 USP18Q9UMW8 372 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 SLC27A6Q9Y2P4 619 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 KIAA1549LQ6ZVL6 1849 aa14.47□□□□□ -0.09
VARS-225ENST00000482996 SPAG17Q6Q759 2223 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 ZBTB24O43167 697 aaPredicted RBP14.46□□□□□ -0.09
VARS-225ENST00000482996 PAPSS1O43252 624 aaPredicted RBP14.46□□□□□ -0.09
VARS-225ENST00000482996 LRP3O75074 770 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 ADAM23O75077 832 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 MYL5Q02045 173 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 KCNMA1Q12791 1236 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 NNTQ13423 1086 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 DRAP1Q14919 205 aaPredicted RBP14.46□□□□□ -0.09
VARS-225ENST00000482996 KRT31Q15323 416 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 ADGRF1Q5T601 910 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 EGFLAMQ63HQ2 1017 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 TMEM92Q6UXU6 159 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 C11orf57Q6ZUT1 292 aaPredicted RBP14.46□□□□□ -0.09
VARS-225ENST00000482996 C11orf74Q86VG3 221 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 RASSF3Q86WH2 238 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 PASD1Q8IV76 773 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 CHPFQ8IZ52 775 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 FAM160A2Q8N612 972 aaPredicted RBP14.46□□□□□ -0.09
VARS-225ENST00000482996 DQX1Q8TE96 717 aaKnown RBP14.46□□□□□ -0.09
VARS-225ENST00000482996 UCMAQ8WVF2 138 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 LOXL4Q96JB6 756 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 PPP1R13BQ96KQ4 1090 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 DDX50Q9BQ39 737 aaKnown RBP14.46□□□□□ -0.09
VARS-225ENST00000482996 VPS16Q9H269 839 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 PDCL3Q9H2J4 239 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 POPDC2Q9HBU9 364 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 ZDHHC4Q9NPG8 344 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 FANCLQ9NW38 375 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 CYTH4Q9UIA0 394 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 STOML2Q9UJZ1 356 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 FHOD1Q9Y613 1164 aa14.46□□□□□ -0.09
VARS-225ENST00000482996 PRRT4C9JH25 899 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 TSPAN3O60637 253 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 IGLV3-27P01718 113 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 FYNP06241 537 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 PNMA6AP0CW24 399 aaPredicted RBP14.45□□□□□ -0.1
VARS-225ENST00000482996 HOXB2P14652 356 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 HNRNPLP14866 589 aaKnown RBP eCLIP14.45□□□□□ -0.1
VARS-225ENST00000482996 UCHL3P15374 230 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 CLCN1P35523 988 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 YWHAZP63104 245 aaKnown RBP14.45□□□□□ -0.1
VARS-225ENST00000482996 ELF2Q15723 593 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 DPY19L2P1Q6NXN4 242 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 ANKS1BQ7Z6G8 1248 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 KBTBD6Q86V97 674 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 SLC47A2Q86VL8 602 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 PGBD3Q8N328 593 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 MDGA1Q8NFP4 955 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 IPO4Q8TEX9 1081 aaKnown RBP14.45□□□□□ -0.1
VARS-225ENST00000482996 HMGB4Q8WW32 186 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 AZIN2Q96A70 460 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 TMA16Q96EY4 203 aaKnown RBP14.45□□□□□ -0.1
VARS-225ENST00000482996 STK33Q9BYT3 514 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 IRX2Q9BZI1 471 aaPredicted RBP14.45□□□□□ -0.1
VARS-225ENST00000482996 TPSD1Q9BZJ3 242 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 SYNCQ9H7C4 482 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 PLCB1Q9NQ66 1216 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 NAALADL1Q9UQQ1 740 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 TLR6Q9Y2C9 796 aa14.45□□□□□ -0.1
VARS-225ENST00000482996 TCRBV21S2A2A0A5A6 115 aa14.44□□□□□ -0.1
VARS-225ENST00000482996 GFRA2O00451 464 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms