RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 METTL18O95568 372 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 KCNA2P16389 499 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 SP2Q02086 613 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 SLC25A11Q02978 314 aaKnown RBP13.11□□□□□ -0.31
VPS52-218ENST00000482399 LY6KQ17RY6 165 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 NBPF12Q5TAG4 269 aaPredicted RBP13.11□□□□□ -0.31
VPS52-218ENST00000482399 WDR49Q8IV35 697 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 PHTF2Q8N3S3 785 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 ZNF669Q96BR6 464 aaPredicted RBP13.11□□□□□ -0.31
VPS52-218ENST00000482399 FAM136AQ96C01 138 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 PEBP4Q96S96 227 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 CDRT15Q96T59 188 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 ACAD9Q9H845 621 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 CAB39LQ9H9S4 337 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 TSPAN16Q9UKR8 245 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 FKBP6O75344 327 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 SPAG6O75602 509 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 ARL4AP40617 200 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 FOLH1Q04609 750 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 GOLGA7BQ2TAP0 167 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 RBM44Q6ZP01 1051 aaKnown RBP13.11□□□□□ -0.31
VPS52-218ENST00000482399 RNF157Q96PX1 679 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 CNPY3Q9BT09 278 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 SPATA16Q9BXB7 569 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 Q9H521 79 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 C20orf96Q9NUD7 363 aaPredicted RBP13.11□□□□□ -0.31
VPS52-218ENST00000482399 ZNF711Q9Y462 761 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 TEX264Q9Y6I9 313 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 CSPG5O95196 566 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 P4HA1P13674 534 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 CYP2F1P24903 491 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 ADORA2AP29274 412 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 ETV4P43268 484 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 NDST1P52848 882 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 SLC18A1P54219 525 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 IFRD2Q12894 506 aaPredicted RBP13.1□□□□□ -0.31
VPS52-218ENST00000482399 SLC5A9Q2M3M2 681 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 MAP7D1Q3KQU3 841 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 KRT80Q6KB66 452 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 C15orf39Q6ZRI6 1047 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 CHSY1Q86X52 802 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 SNX32Q86XE0 403 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 XYLT1Q86Y38 959 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 PLD5Q8N7P1 536 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 HPDLQ96IR7 371 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 ARHGAP26Q9UNA1 814 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 RPL26L1Q9UNX3 145 aaKnown RBP13.1□□□□□ -0.31
VPS52-218ENST00000482399 ARFGEF1Q9Y6D6 1849 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 ABLIM1O14639 778 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 AMHP03971 560 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 SERPINA6P08185 405 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 TPH1P17752 444 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 MX2P20592 715 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 EPHA3P29320 983 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 SCNN1BP51168 640 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 MRPS5P82675 430 aaKnown RBP13.1□□□□□ -0.31
VPS52-218ENST00000482399 TMEM62Q0P6H9 643 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 LAMTOR4Q0VGL1 99 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 PDE1CQ14123 709 aaPredicted RBP13.1□□□□□ -0.31
VPS52-218ENST00000482399 FAM47CQ5HY64 1035 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 FAM160B1Q5W0V3 765 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 FAM183BPQ6ZVS7 135 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 SPATA6LQ8N4H0 392 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 TMEM176AQ96HP8 235 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 CATSPER2Q96P56 530 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 LPIN3Q9BQK8 851 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 NUF2Q9BZD4 464 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 ZNF518BQ9C0D4 1074 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 TRPV6Q9H1D0 765 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 MMADHCQ9H3L0 296 aaPredicted RBP13.1□□□□□ -0.31
VPS52-218ENST00000482399 CAAP1Q9H8G2 361 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 MYH9P35579 1960 aaKnown RBP13.1□□□□□ -0.31
VPS52-218ENST00000482399 TPST1O60507 370 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 MAGEC1O60732 1142 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 TGDSO95455 350 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 VAV1P15498 845 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 CDK7P50613 346 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 R3HDM1Q15032 1099 aaKnown RBP13.1□□□□□ -0.31
VPS52-218ENST00000482399 NOMO1Q15155 1222 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 DLG2Q15700 870 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 SPDYE2Q495Y8 402 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 PAOXQ6QHF9 649 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 MCUQ8NE86 351 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 EME1Q96AY2 570 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 SNRNP25Q9BV90 132 aaKnown RBP13.1□□□□□ -0.31
VPS52-218ENST00000482399 MRPL1Q9BYD6 325 aaKnown RBP13.1□□□□□ -0.31
VPS52-218ENST00000482399 SLC39A10Q9ULF5 831 aa13.1□□□□□ -0.31
VPS52-218ENST00000482399 C15orf38-AP3S2A0A0A6YYH1 394 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 EGFRP00533 1210 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
VPS52-218ENST00000482399 SRGAP2BP0DMP2 458 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 CPA3P15088 417 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 GARSP41250 739 aaKnown RBP13.09□□□□□ -0.31
VPS52-218ENST00000482399 FSCBQ5H9T9 825 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 MAP3K21Q5TCX8 1036 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 ANGEL2Q5VTE6 544 aaKnown RBP13.09□□□□□ -0.31
VPS52-218ENST00000482399 ARPINQ7Z6K5 226 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 SNX31Q8N9S9 440 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 GATA6Q92908 595 aa13.09□□□□□ -0.31
VPS52-218ENST00000482399 TEX13BQ9BXU2 312 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms