RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 CISD3P0C7P0 127 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 UCHL3P15374 230 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 KRT9P35527 623 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 RING1Q06587 406 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 KRT31Q15323 416 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 MPPE1Q53F39 396 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 ADGRF1Q5T601 910 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 KLHDC7AQ5VTJ3 777 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 ANO7Q6IWH7 933 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 DPY19L2P1Q6NXN4 242 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 TOGARAM2Q6ZUX3 1019 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 CACNA2D4Q7Z3S7 1137 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 SLC47A2Q86VL8 602 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 RASSF3Q86WH2 238 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 PASD1Q8IV76 773 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 UNC45BQ8IWX7 931 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 KIAA2013Q8IYS2 634 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 FAM160A2Q8N612 972 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-213ENST00000482192 ANKRD20A12PQ8NF67 263 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 DDI1Q8WTU0 396 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 SERPINB11Q96P15 392 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 LSM14BQ9BX40 385 aaKnown RBP12.39□□□□□ -0.43
HMGN1-213ENST00000482192 SLC2A11Q9BYW1 496 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 POLMQ9NP87 494 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-213ENST00000482192 ZDHHC4Q9NPG8 344 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 FANCLQ9NW38 375 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 FBXO10Q9UK96 956 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 SLC27A6Q9Y2P4 619 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 CEP83Q9Y592 693 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 FHOD1Q9Y613 1164 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 MYO15AQ9UKN7 3530 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 PRRT4C9JH25 899 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 ADAM23O75077 832 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 PNMA6AP0CW24 399 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-213ENST00000482192 NTSR1P30989 418 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 CLCN1P35523 988 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 SLC11A2P49281 568 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 TBX4P57082 545 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 SNX16P57768 344 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 YWHAZP63104 245 aaKnown RBP12.38□□□□□ -0.43
HMGN1-213ENST00000482192 NNTQ13423 1086 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 DRAP1Q14919 205 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-213ENST00000482192 FKBP15Q5T1M5 1219 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 SDE2Q6IQ49 451 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 TMEM92Q6UXU6 159 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 CHPFQ8IZ52 775 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 WDTC1Q8N5D0 677 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 MDGA1Q8NFP4 955 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 DQX1Q8TE96 717 aaKnown RBP12.38□□□□□ -0.43
HMGN1-213ENST00000482192 P2RY11Q96G91 374 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 PPP1R13BQ96KQ4 1090 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 CPXM1Q96SM3 734 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 NAA15Q9BXJ9 866 aaKnown RBP12.38□□□□□ -0.43
HMGN1-213ENST00000482192 IRX2Q9BZI1 471 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-213ENST00000482192 NAT10Q9H0A0 1025 aaKnown RBP12.38□□□□□ -0.43
HMGN1-213ENST00000482192 VPS16Q9H269 839 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 POPDC2Q9HBU9 364 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 PLCB1Q9NQ66 1216 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 NAALADL1Q9UQQ1 740 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 TLR6Q9Y2C9 796 aa12.38□□□□□ -0.43
HMGN1-213ENST00000482192 TCRBV21S2A2A0A5A6 115 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 F8VZ95 297 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 IRAK2O43187 625 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 LRP3O75074 770 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 GLI1P08151 1106 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 HOXB2P14652 356 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 HNRNPLP14866 589 aaKnown RBP eCLIP12.37□□□□□ -0.43
HMGN1-213ENST00000482192 CYP11B1P15538 503 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 TYRO3Q06418 890 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 EIF4HQ15056 248 aaKnown RBP12.37□□□□□ -0.43
HMGN1-213ENST00000482192 E2F5Q15329 346 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 USP39Q53GS9 565 aaKnown RBP12.37□□□□□ -0.43
HMGN1-213ENST00000482192 SYPL2Q5VXT5 272 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 EGFLAMQ63HQ2 1017 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 ANKS1BQ7Z6G8 1248 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 TAC4Q86UU9 113 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 KBTBD6Q86V97 674 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 C11orf74Q86VG3 221 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 C1orf131Q8NDD1 294 aaKnown RBP12.37□□□□□ -0.43
HMGN1-213ENST00000482192 IPO4Q8TEX9 1081 aaKnown RBP12.37□□□□□ -0.43
HMGN1-213ENST00000482192 AZIN2Q96A70 460 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 LOXL4Q96JB6 756 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 ZC3H10Q96K80 434 aaKnown RBP12.37□□□□□ -0.43
HMGN1-213ENST00000482192 FCRL2Q96LA5 508 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-213ENST00000482192 DDX50Q9BQ39 737 aaKnown RBP12.37□□□□□ -0.43
HMGN1-213ENST00000482192 STK33Q9BYT3 514 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 TPSD1Q9BZJ3 242 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 PDCL3Q9H2J4 239 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 SYNCQ9H7C4 482 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 TMEM63CQ9P1W3 806 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 BCCIPQ9P287 314 aaKnown RBP eCLIP12.37□□□□□ -0.43
HMGN1-213ENST00000482192 HCN2Q9UL51 889 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 DAAM1Q9Y4D1 1078 aa12.37□□□□□ -0.43
HMGN1-213ENST00000482192 GFRA2O00451 464 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 NPC1O15118 1278 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 ZBTB24O43167 697 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-213ENST00000482192 ACSL4O60488 711 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 TSPAN3O60637 253 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 HSF2BPO75031 334 aa12.36□□□□□ -0.43
HMGN1-213ENST00000482192 HOXD9P28356 352 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms