RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 MRGPRGQ86SM5 289 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 HERC6Q8IVU3 1022 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 C12orf76Q8N812 135 aaPredicted RBP6.53□□□□□ -1.36
SF3B1-210ENST00000482158 SIMC1Q8NDZ2 872 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 CSGALNACT1Q8TDX6 532 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 MMS19Q96T76 1030 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 TWSG1Q9GZX9 223 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 PCED1AQ9H1Q7 454 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 ABHD16BQ9H3Z7 469 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 ELAC1Q9H777 363 aaKnown RBP6.53□□□□□ -1.36
SF3B1-210ENST00000482158 SNX15Q9NRS6 342 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 KIF17Q9P2E2 1029 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 FEM1BQ9UK73 627 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 NFU1Q9UMS0 254 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 C19orf53Q9UNZ5 99 aaPredicted RBP6.53□□□□□ -1.36
SF3B1-210ENST00000482158 SLC38A8A6NNN8 435 aa6.52□□□□□ -1.37
SF3B1-210ENST00000482158 RAMP2O60895 175 aa6.52□□□□□ -1.37
SF3B1-210ENST00000482158 MMP8P22894 467 aa6.52□□□□□ -1.37
SF3B1-210ENST00000482158 GALNSP34059 522 aa6.52□□□□□ -1.37
SF3B1-210ENST00000482158 IGHMBP2P38935 993 aaKnown RBP6.52□□□□□ -1.37
SF3B1-210ENST00000482158 RAE1P78406 368 aaKnown RBP6.52□□□□□ -1.37
SF3B1-210ENST00000482158 SF3A3Q12874 501 aaKnown RBP eCLIP6.52□□□□□ -1.374e-9■■□□□ 14.1
SF3B1-210ENST00000482158 FHL2Q14192 279 aa6.52□□□□□ -1.37
SF3B1-210ENST00000482158 AAK1Q2M2I8 961 aa6.52□□□□□ -1.37
SF3B1-210ENST00000482158 CYP26C1Q6V0L0 522 aa6.52□□□□□ -1.37
SF3B1-210ENST00000482158 KRT27Q7Z3Y8 459 aa6.52□□□□□ -1.37
SF3B1-210ENST00000482158 GRASPQ7Z6J2 395 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-210ENST00000482158 FTSJ3Q8IY81 847 aaKnown RBP6.52□□□□□ -1.37
SF3B1-210ENST00000482158 THAP4Q8WY91 577 aa6.52□□□□□ -1.37
SF3B1-210ENST00000482158 RUBCNQ92622 972 aa6.52□□□□□ -1.37
SF3B1-210ENST00000482158 CIPCQ9C0C6 399 aa6.52□□□□□ -1.37
SF3B1-210ENST00000482158 TAF1DQ9H5J8 278 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-210ENST00000482158 GAR1Q9NY12 217 aaKnown RBP6.52□□□□□ -1.37
SF3B1-210ENST00000482158 SEMA5BQ9P283 1151 aa6.52□□□□□ -1.37
SF3B1-210ENST00000482158 FZD4Q9ULV1 537 aa6.52□□□□□ -1.37
SF3B1-210ENST00000482158 TCRBV5S1A1TA0A578 114 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 FAM90A20PA6NIJ5 464 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 IRAK2O43187 625 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 LARGE1O95461 756 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 HNRNPCP07910 306 aaKnown RBP eCLIP6.51□□□□□ -1.37
SF3B1-210ENST00000482158 PEPDP12955 493 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 ZNF37AP17032 561 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-210ENST00000482158 WT1P19544 449 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-210ENST00000482158 THBS4P35443 961 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 COPB1P53618 953 aaKnown RBP6.51□□□□□ -1.37
SF3B1-210ENST00000482158 TXNL4AP83876 142 aaKnown RBP6.51□□□□□ -1.37
SF3B1-210ENST00000482158 CFHR3Q02985 330 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 DPTQ07507 201 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 CCDC15Q0P6D6 951 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 ANKRD18AQ8IVF6 992 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 TERB1Q8NA31 727 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 NGDNQ8NEJ9 315 aaKnown RBP6.51□□□□□ -1.37
SF3B1-210ENST00000482158 OR6Y1Q8NGX8 325 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 HMGB4Q8WW32 186 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 UROC1Q96N76 676 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 EIF3CQ99613 913 aaKnown RBP6.51□□□□□ -1.37
SF3B1-210ENST00000482158 CINPQ9BW66 212 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-210ENST00000482158 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 KLK15Q9H2R5 256 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 PRDM13Q9H4Q3 707 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 CCDC134Q9H6E4 229 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 USP29Q9HBJ7 922 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 FBXO28Q9NVF7 368 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 SLC17A6Q9P2U8 582 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.51□□□□□ -1.37
SF3B1-210ENST00000482158 KCND3Q9UK17 655 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 VPS4AQ9UN37 437 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 UBE2J1Q9Y385 318 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-210ENST00000482158 DMRT1Q9Y5R6 373 aa6.51□□□□□ -1.37
SF3B1-210ENST00000482158 COL11A2P13942 1736 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-210ENST00000482158 NKX2-8O15522 239 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 RHOBTB3O94955 611 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 FSHBP01225 129 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 CKMT1AP12532 417 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 CLK3P49761 638 aaKnown RBP6.5□□□□□ -1.37
SF3B1-210ENST00000482158 FOXL2P58012 376 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 RPL15P61313 204 aaKnown RBP6.5□□□□□ -1.37
SF3B1-210ENST00000482158 FBXO47Q5MNV8 452 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 DENND2CQ68D51 928 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 SLC29A4Q7RTT9 530 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 ZNF804AQ7Z570 1209 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 FAM71DQ8N9W8 422 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 OR52L2PQ8NGH6 319 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 MAFAQ8NHW3 353 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-210ENST00000482158 CAGE1Q8TC20 777 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 GLMPQ8WWB7 406 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 TRIM63Q969Q1 353 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 C3orf49Q96BT1 292 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 SDCCAG3Q96C92 435 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 TRMT61AQ96FX7 289 aaKnown RBP6.5□□□□□ -1.37
SF3B1-210ENST00000482158 UBXN10Q96LJ8 280 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 BRD8Q9H0E9 1235 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 CDCP1Q9H5V8 836 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 G6PC2Q9NQR9 355 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 ABHD10Q9NUJ1 306 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 ASB6Q9NWX5 421 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 SERGEFQ9UGK8 458 aa6.5□□□□□ -1.37
SF3B1-210ENST00000482158 EFCAB8A8MWE9 144 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 H3BNC9 293 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 EIF3FO00303 357 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms