RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 DUSP10Q9Y6W6 482 aa12.08□□□□□ -0.48
HPS4-212ENST00000481910 C2CD4BA6NLJ0 364 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 PJA2O43164 708 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 COCHO43405 550 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 OAS1P00973 400 aaKnown RBP12.07□□□□□ -0.48
HPS4-212ENST00000481910 HDCP19113 662 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 GPD1P21695 349 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 TRPC1P48995 793 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 TRNP1Q6NT89 227 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 IQCF2Q8IXL9 164 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 RBM12BQ8IXT5 1001 aaKnown RBP12.07□□□□□ -0.48
HPS4-212ENST00000481910 KRT222Q8N1A0 295 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 ZNF276Q8N554 614 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 ARL14EPQ8N8R7 260 aaPredicted RBP12.07□□□□□ -0.48
HPS4-212ENST00000481910 RMDN2Q96LZ7 410 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 CFAP57Q96MR6 1250 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 DDX23Q9BUQ8 820 aaKnown RBP12.07□□□□□ -0.48
HPS4-212ENST00000481910 SLC46A2Q9BY10 475 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 TRIM7Q9C029 511 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 TASP1Q9H6P5 420 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 SFMBT1Q9UHJ3 866 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 ANAPC7Q9UJX3 599 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 PYCARDQ9ULZ3 195 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 A0A0A6YYK5 440 aaPredicted RBP12.07□□□□□ -0.48
HPS4-212ENST00000481910 MYO1FO00160 1098 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 ZSCAN12O43309 604 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 KRT86O43790 486 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 CEBPBP17676 345 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 DDX6P26196 483 aaKnown RBP eCLIP12.07□□□□□ -0.48
HPS4-212ENST00000481910 SDC4P31431 198 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 ATP11AP98196 1134 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 EFEMP1Q12805 493 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 SLC25A52Q3SY17 297 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 TTC31Q49AM3 519 aaPredicted RBP12.07□□□□□ -0.48
HPS4-212ENST00000481910 CCDC26Q8TAB7 109 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 ADAM32Q8TC27 787 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 FGF13Q92913 245 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 NECTIN4Q96NY8 510 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 SLC22A12Q96S37 553 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 TSGA10Q9BZW7 698 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 POMKQ9H5K3 350 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 LZTFL1Q9NQ48 299 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 TRIM10Q9UDY6 481 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 DNMT3LQ9UJW3 386 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 GUCA1BQ9UMX6 200 aa12.07□□□□□ -0.48
HPS4-212ENST00000481910 SYNJ2BP-COX16A0A087WUM0 186 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 TRAV19A0A0A6YYK7 116 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 MACROD2A1Z1Q3 448 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 SOBPA7XYQ1 873 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 BTNL10A8MVZ5 291 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 M0QYT0 321 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 MDM4O15151 490 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 BUB1O43683 1085 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 CREB3O43889 395 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 STK10O94804 968 aaKnown RBP12.06□□□□□ -0.48
HPS4-212ENST00000481910 TRUB2O95900 331 aaKnown RBP12.06□□□□□ -0.48
HPS4-212ENST00000481910 CKMP06732 381 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 MBL2P11226 248 aaPredicted RBP12.06□□□□□ -0.48
HPS4-212ENST00000481910 DESP17661 470 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 PFKLP17858 780 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 PSMA2P25787 234 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 AVPR1AP37288 418 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 SULT1E1P49888 294 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 ZNF143P52747 638 aaPredicted RBP12.06□□□□□ -0.48
HPS4-212ENST00000481910 PITX1P78337 314 aaPredicted RBP12.06□□□□□ -0.48
HPS4-212ENST00000481910 OGDHQ02218 1023 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 TCEAL1Q15170 157 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 CDO1Q16878 200 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 CCDC14Q49A88 953 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 ARHGAP29Q52LW3 1261 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 C16orf87Q6PH81 154 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 KLHDC10Q6PID8 442 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 MIB1Q86YT6 1006 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 CMTM8Q8IZV2 173 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 DQX1Q8TE96 717 aaKnown RBP12.06□□□□□ -0.48
HPS4-212ENST00000481910 SUSD6Q92537 303 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 NT5C3BQ969T7 300 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 BTBD6Q96KE9 485 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 ZSWIM3Q96MP5 696 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 NPY6RQ99463 290 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 MFRPQ9BY79 579 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 RRN3Q9NYV6 651 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.06□□□□□ -0.48
HPS4-212ENST00000481910 MARCH2Q9P0N8 246 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 COX16Q9P0S2 106 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 ZMYM5Q9UJ78 669 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 RASAL2Q9UJF2 1139 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 SALL4Q9UJQ4 1053 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 REV3LO60673 3130 aa12.06□□□□□ -0.48
HPS4-212ENST00000481910 GRXCR2A6NFK2 248 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 MBTPS2O43462 519 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 TFE3P19532 575 aaPredicted RBP12.05□□□□□ -0.48
HPS4-212ENST00000481910 GBP1P32455 592 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 GBP2P32456 591 aaPredicted RBP12.05□□□□□ -0.48
HPS4-212ENST00000481910 PTPN9P43378 593 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 NME3Q13232 169 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 SMAD4Q13485 552 aaKnown RBP12.05□□□□□ -0.48
HPS4-212ENST00000481910 C15orf59Q2T9L4 293 aaPredicted RBP12.05□□□□□ -0.48
HPS4-212ENST00000481910 MSANTD2Q6P1R3 559 aa12.05□□□□□ -0.48
HPS4-212ENST00000481910 NPAS3Q8IXF0 933 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms