RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 KSR1Q8IVT5 923 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 PCSK9Q8NBP7 692 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 DAGLBQ8NCG7 672 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 LSM14AQ8ND56 463 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 ZNF606Q8WXB4 792 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 TP53INP1Q96A56 240 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 CABS1Q96KC9 395 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 COX4I2Q96KJ9 171 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 FER1L6-AS2Q96M78 137 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 TRAPPC9Q96Q05 1148 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 ALPK1Q96QP1 1244 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 NR1H4Q96RI1 486 aaPredicted RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 MED15Q96RN5 788 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 TP63Q9H3D4 680 aaPredicted RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 ZWILCHQ9H900 591 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 SCPEP1Q9HB40 452 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 SEMA4BQ9NPR2 832 aaPredicted RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 RIC8BQ9NVN3 520 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 MCM9Q9NXL9 1143 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 PLAGL2Q9UPG8 496 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 PCDHGA5Q9Y5G8 931 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 PCDHGA1Q9Y5H4 931 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 COL4A3Q01955 1670 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 PDCD11Q14690 1871 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 PRAMEF25A6NGN4 478 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 H0YAE9 185 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 PLOD2O00469 737 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 CPLX1O14810 134 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 SGTAO43765 313 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 ALDH3A2P51648 485 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 CLNS1AP54105 237 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 MRPS35P82673 323 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 UBXN1Q04323 297 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 MST1LQ2TV78 715 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 ADCK5Q3MIX3 580 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 LEXMQ3ZCV2 418 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 ZRANB3Q5FWF4 1079 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 TRIM68Q6AZZ1 485 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 TIGD7Q6NT04 549 aaPredicted RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 ALYREFQ86V81 257 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 FAM129CQ86XR2 697 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 DIS3L2Q8IYB7 885 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 STAMQ92783 540 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 TNPO1Q92973 898 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 BORCS6Q96GS4 357 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 AK8Q96MA6 479 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 CHODLQ9H9P2 273 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 STOML1Q9UBI4 398 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 TCFL5Q9UL49 500 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 KCNH3Q9ULD8 1083 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 AGAP1Q9UPQ3 857 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 RAXQ9Y2V3 346 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 PTGES3LE9PB15 166 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 K7EPI3 171 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 SCAMP1O15126 338 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 LMNAP02545 664 aaKnown RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 SYPP08247 313 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 TXNP10599 105 aaKnown RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 UBL4AP11441 157 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 EIF2DP41214 584 aaKnown RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 RPL11P62913 178 aaKnown RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 MAP2K1Q02750 393 aaPredicted RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 GRIN1Q05586 938 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 ADCY2Q08462 1091 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 KLHL30Q0D2K2 578 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 PTP4A2Q12974 167 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 MAPKAPK3Q16644 382 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 ZNF628Q5EBL2 1059 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 BEND5Q7L4P6 421 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 ADGRG6Q86SQ4 1221 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 LCA5Q86VQ0 697 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 ARMC8Q8IUR7 673 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 REPS2Q8NFH8 660 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 PIGOQ8TEQ8 1089 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 FATE1Q969F0 183 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 MASTLQ96GX5 879 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 PPP1R13BQ96KQ4 1090 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 CLSTN3Q9BQT9 956 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 LTB4R2Q9NPC1 389 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 RBM12Q9NTZ6 932 aaKnown RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 ARGLU1Q9NWB6 273 aaPredicted RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 EPS15L1Q9UBC2 864 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 TBX20Q9UMR3 447 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 SLC45A2Q9UMX9 530 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 FAM205AQ6ZU69 1335 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 CLGNO14967 610 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 PPP6R2O75170 966 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 THEGLP0DJG4 465 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 P4HA1P13674 534 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 PBX3P40426 434 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 ZNF41P51814 821 aaPredicted RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 MLLT6P55198 1093 aaPredicted RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 SMC1AQ14683 1233 aaKnown RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 SLMAPQ14BN4 828 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 FAM69AQ5T7M9 428 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 CDKAL1Q5VV42 579 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 SLFN12LQ6IEE8 588 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 MEX3BQ6ZN04 569 aaKnown RBP3.57□□□□□ -1.84
SMC6-208ENST00000481708 RAPH1Q70E73 1250 aa3.57□□□□□ -1.84
SMC6-208ENST00000481708 EGFL6Q8IUX8 553 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms