RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 IGLV3-27P01718 113 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 LMNAP02545 664 aaKnown RBP11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 APODP05090 189 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 NCAM1P13591 858 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 CYP11B1P15538 503 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 CHRNB2P17787 502 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 TFE3P19532 575 aaPredicted RBP11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 GRIA2P42262 883 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 POLR2FP61218 127 aaKnown RBP11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 AMPD2Q01433 879 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 GEN1Q17RS7 908 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 C10orf76Q5T2E6 689 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 OTUD1Q5VV17 481 aaPredicted RBP11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 PHLDB2Q86SQ0 1253 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 FRMD1Q8N878 549 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 TERB1Q8NA31 727 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 WFDC5Q8TCV5 224 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 RNF139Q8WU17 664 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 ATRIPQ8WXE1 791 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 SORCS1Q8WY21 1168 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 IRGQQ8WZA9 623 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 FAM149B1Q96BN6 582 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 OTUB2Q96DC9 234 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 FCRL2Q96LA5 508 aaPredicted RBP11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 IER2Q9BTL4 223 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 RTN4Q9NQC3 1192 aaKnown RBP11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 ABCC13Q9NSE7 274 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 STRIP2Q9ULQ0 834 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 PCDHGC3Q9UN70 934 aa11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 SMG5Q9UPR3 1016 aaKnown RBP11.9□□□□□ -0.5
RAPGEF1-207ENST00000481260 A0A0A0MRY4 1105 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 TBC1D3BA6NDS4 549 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 WASH3PC4AMC7 463 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 MED7O43513 233 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 MMEP08473 750 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 NUMBP49757 651 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 JAM2P57087 298 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 COG7P83436 770 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 GOLGA8FQ08AF8 430 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 GOLGA8DPQ0D2H9 430 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 FAM133BQ5BKY9 247 aaKnown RBP11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 TMEM215Q68D42 235 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 GRAMD4Q6IC98 578 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 KIAA1211LQ6NV74 962 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 SYT13Q7L8C5 426 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 TADA2BQ86TJ2 420 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 FAM217AQ8IXS0 508 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 STK32AQ8WU08 396 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 PLD4Q96BZ4 506 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 PPP1R13BQ96KQ4 1090 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 PRICKLE1Q96MT3 831 aaPredicted RBP11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 CDK5RAP1Q96SZ6 601 aaKnown RBP11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 TPSD1Q9BZJ3 242 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 SLC6A17Q9H1V8 727 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 EPC1Q9H2F5 836 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 DEC1Q9P2X7 70 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 NOCTQ9UK39 431 aaKnown RBP11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 SLC8A2Q9UPR5 921 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 RAD54BQ9Y620 910 aa11.89□□□□□ -0.51
RAPGEF1-207ENST00000481260 SYNJ2BP-COX16A0A087WUM0 186 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 FBXO21O94952 628 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 GJB6O95452 261 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 MOCS2O96007 188 aaPredicted RBP11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 IGLV3-25P01717 112 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 HOXD9P28356 352 aaPredicted RBP11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 EIF2DP41214 584 aaKnown RBP11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 TBX4P57082 545 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 UBXN1Q04323 297 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 PTK2Q05397 1052 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 IQCB1Q15051 598 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 CCDC6Q16204 474 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 FBXO43Q4G163 708 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 RAB6CQ53S08 254 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 ZC3H12AQ5D1E8 599 aaKnown RBP11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 OR6B2Q6IFH4 312 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 ANO7Q6IWH7 933 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 TRNP1Q6NT89 227 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 OLFML1Q6UWY5 402 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 PRR23BQ6ZRT6 265 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 KBTBD6Q86V97 674 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 WDR5BQ86VZ2 330 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 LONP2Q86WA8 852 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 DEFB106AQ8N104 65 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 MDGA1Q8NFP4 955 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 OLIG1Q8TAK6 271 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 EPS8L1Q8TE68 723 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 CPA5Q8WXQ8 436 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 SLC39A13Q96H72 371 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 NAP1L5Q96NT1 182 aaPredicted RBP11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 PCDHB18PQ96TA0 734 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 STK33Q9BYT3 514 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 RAB6CQ9H0N0 254 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 NUCKS1Q9H1E3 243 aaKnown RBP11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 LHX5Q9H2C1 402 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 PARD6AQ9NPB6 346 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 CD93Q9NPY3 652 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 ANLNQ9NQW6 1124 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 CACNA2D2Q9NY47 1150 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 COX16Q9P0S2 106 aa11.88□□□□□ -0.51
RAPGEF1-207ENST00000481260 FBXO10Q9UK96 956 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms