RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 SOBPA7XYQ1 873 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 CCL16O15467 120 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 OLFM2O95897 454 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 IGLV3-27P01718 113 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 APOEP02649 317 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 FGGP02679 453 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 F11P03951 625 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 DDX6P26196 483 aaKnown RBP eCLIP13.07□□□□□ -0.32
SIK3-209ENST00000480222 ATP5C1P36542 298 aaKnown RBP13.07□□□□□ -0.32
SIK3-209ENST00000480222 NRIP1P48552 1158 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 ATXN1P54253 815 aaKnown RBP13.07□□□□□ -0.32
SIK3-209ENST00000480222 CDH6P55285 790 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 TBX4P57082 545 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 EFEMP1Q12805 493 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 KRT81Q14533 505 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 TAZQ16635 292 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 RAB6CQ53S08 254 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 KCNT1Q5JUK3 1230 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 SPOCD1Q6ZMY3 1216 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 TMEM150AQ86TG1 271 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 SLC13A5Q86YT5 568 aaPredicted RBP13.07□□□□□ -0.32
SIK3-209ENST00000480222 CCDC185Q8N715 623 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 KCTD6Q8NC69 237 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 MRPS31Q92665 395 aaKnown RBP13.07□□□□□ -0.32
SIK3-209ENST00000480222 SLC39A13Q96H72 371 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 RAB6CQ9H0N0 254 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 WDCPQ9H6R7 721 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 CCSER2Q9H7U1 834 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 PRDM16Q9HAZ2 1276 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 KLHL11Q9NVR0 708 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.07□□□□□ -0.32
SIK3-209ENST00000480222 ARHGEF38Q9NXL2 777 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 COX16Q9P0S2 106 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 RASAL2Q9UJF2 1139 aa13.07□□□□□ -0.32
SIK3-209ENST00000480222 HELZP42694 1942 aaKnown RBP13.06□□□□□ -0.32
SIK3-209ENST00000480222 hCG_1818297A0A087WSY0 165 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 CTAGE15A4D2H0 777 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 C3orf70A6NLC5 250 aaPredicted RBP13.06□□□□□ -0.32
SIK3-209ENST00000480222 CCDC188H7C350 402 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 PER2O15055 1255 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 MSI1O43347 362 aaKnown RBP13.06□□□□□ -0.32
SIK3-209ENST00000480222 COCHO43405 550 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 RFPL2O75678 378 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 SLU7O95391 586 aaKnown RBP13.06□□□□□ -0.32
SIK3-209ENST00000480222 CTAGE8P0CG41 777 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 PTPN2P17706 415 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 KDELR1P24390 212 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 GABRR2P28476 465 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 HTR7P34969 479 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 ADRA1BP35368 520 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 CDKN2BP42772 138 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 ARSEP51690 589 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 KCNC3Q14003 757 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 DPYSL3Q14195 570 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 LONRF2Q1L5Z9 754 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 NUGGCQ68CJ6 796 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 TMEM184AQ6ZMB5 413 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 PDZD4Q76G19 769 aaPredicted RBP13.06□□□□□ -0.32
SIK3-209ENST00000480222 RBM23Q86U06 439 aaKnown RBP13.06□□□□□ -0.32
SIK3-209ENST00000480222 CTAGE6Q86UF2 777 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 CTAGE4Q8IX94 777 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 RAPGEF5Q92565 580 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 RNF34Q969K3 372 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 PLD4Q96BZ4 506 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 ACSF2Q96CM8 615 aaPredicted RBP13.06□□□□□ -0.32
SIK3-209ENST00000480222 FAF2Q96CS3 445 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 HAPLN3Q96S86 360 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 CORO1BQ9BR76 489 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 OSBPL8Q9BZF1 889 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 PRKD2Q9BZL6 878 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 TKTL2Q9H0I9 626 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 DHX35Q9H5Z1 703 aaKnown RBP13.06□□□□□ -0.32
SIK3-209ENST00000480222 PCDH18Q9HCL0 1135 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 SFMBT1Q9UHJ3 866 aa13.06□□□□□ -0.32
SIK3-209ENST00000480222 LAMA2P24043 3122 aaKnown RBP13.06□□□□□ -0.32
SIK3-209ENST00000480222 KCNU1A8MYU2 1149 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 H3BRJ5 948 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 PDE2AO00408 941 aaPredicted RBP13.05□□□□□ -0.32
SIK3-209ENST00000480222 RIOK3O14730 519 aaKnown RBP13.05□□□□□ -0.32
SIK3-209ENST00000480222 TJP3O95049 919 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 ARL4AP40617 200 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 TUBB4BP68371 445 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 COG7P83436 770 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 NRG1Q02297 640 aaPredicted RBP13.05□□□□□ -0.32
SIK3-209ENST00000480222 KLF1Q13351 362 aaPredicted RBP13.05□□□□□ -0.32
SIK3-209ENST00000480222 ATP13A4Q4VNC1 1196 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 MFSD7Q6UXD7 560 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 GAREM2Q75VX8 874 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 MIB1Q86YT6 1006 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 EFHBQ8N7U6 833 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 TSC1Q92574 1164 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 RNF25Q96BH1 459 aaPredicted RBP13.05□□□□□ -0.32
SIK3-209ENST00000480222 MS4A14Q96JA4 679 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 FCRL2Q96LA5 508 aaPredicted RBP13.05□□□□□ -0.32
SIK3-209ENST00000480222 EPAS1Q99814 870 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 CARD6Q9BX69 1037 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 CALN1Q9BXU9 219 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 OSBPL2Q9H1P3 480 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 MTMR10Q9NXD2 777 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 SLC12A6Q9UHW9 1150 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms