RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 E2F2Q14209 437 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 PTK2BQ14289 1009 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 SPARCL1Q14515 664 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 ELF2Q15723 593 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 MAPKAPK3Q16644 382 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 PFKFB4Q16877 469 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 ZIK1Q3SY52 487 aaPredicted RBP4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 FBXO38Q6PIJ6 1188 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 PARS2Q7L3T8 475 aaKnown RBP4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 TECPR1Q7Z6L1 1165 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 SMAP1Q8IYB5 467 aaPredicted RBP4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 CPXCR1Q8N123 301 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 CCDC150Q8NCX0 1101 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 CCT6BQ92526 530 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 DAZAP1Q96EP5 407 aaKnown RBP4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 PTDSS2Q9BVG9 487 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 FSD1LQ9BXM9 530 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 PRSS22Q9GZN4 317 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 KLHL13Q9P2N7 655 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 DGKBQ9Y6T7 804 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 KDM5CP41229 1560 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 HECW2Q9P2P5 1572 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 REREQ9P2R6 1566 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 ABCC1P33527 1531 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 CD109Q6YHK3 1445 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 CASKIN1Q8WXD9 1431 aa4.72□□□□□ -1.65
CDC42BPA-212ENST00000478573 LGALS16A8MUM7 142 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 ITGA5P08648 1049 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 VEGFAP15692 232 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 HOXB6P17509 224 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 KCNA3P22001 575 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 SLC5A2P31639 672 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 SERPINF1P36955 418 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 CCT5P48643 541 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 MYO1EQ12965 1108 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 SLC5A9Q2M3M2 681 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 ZNF750Q32MQ0 723 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 ZNF260Q3ZCT1 412 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 CERKLQ49MI3 558 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 DEPDC1Q5TB30 811 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 PXDC1Q5TGL8 231 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 SERPINA13PQ6UXR4 307 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 LDHAL6AQ6ZMR3 332 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 ZNF280BQ86YH2 543 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 GALNT16Q8N428 558 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 MYCT1Q8N699 235 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 PRSS3P2Q8NHM4 247 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 FAM71BQ8TC56 605 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 BPIFB1Q8TDL5 484 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 TRAPPC12Q8WVT3 735 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 EID2BQ96D98 161 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 SCLT1Q96NL6 688 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 TMEM120AQ9BXJ8 343 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 TRIM5Q9C035 493 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 ZBTB26Q9HCK0 441 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 OBP2BQ9NPH6 170 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 TRNAU1APQ9NX07 287 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 TUBA8Q9NY65 449 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 NDRG4Q9ULP0 352 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 CA14Q9ULX7 337 aa4.71□□□□□ -1.66
CDC42BPA-212ENST00000478573 ADGBQ8N7X0 1667 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 SIGLEC1Q9BZZ2 1709 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 hCG_1984214I3L0E3 225 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 ACKR2O00590 384 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 TRIM38O00635 465 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 HSD3B1P14060 373 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 RENBPP51606 427 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 POLGP54098 1239 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 KRT17Q04695 432 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 Q4G0T1 1027 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 L1TD1Q5T7N2 865 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 MRNIPQ6NTE8 343 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 MZT2AQ6P582 158 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 CRTC1Q6UUV9 634 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 Q6ZWC4 215 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 C8orf58Q8NAV2 365 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 ABHD11Q8NFV4 315 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 RP9Q8TA86 221 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 EVI5LQ96CN4 794 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 LTV1Q96GA3 475 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 RITA1Q96K30 269 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 ZNF668Q96K58 619 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 FAM227BQ96M60 508 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 WACQ9BTA9 647 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.7□□□□□ -1.664e-10■■■□□ 15
CDC42BPA-212ENST00000478573 MAGEH1Q9H213 219 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 CXorf36Q9H7Y0 433 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 DACT1Q9NYF0 836 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 IGSF9Q9P2J2 1179 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 MRPS17Q9Y2R5 130 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 CLIP1P30622 1438 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 TROQ12816 1431 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 MROH2AA6NES4 1674 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 CROCC2H7BZ55 1655 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 RIMS1Q86UR5 1692 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 WDR17Q8IZU2 1322 aa4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 INO80Q9ULG1 1556 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-212ENST00000478573 ABCA6Q8N139 1617 aa4.69□□□□□ -1.66
CDC42BPA-212ENST00000478573 KIDINS220Q9ULH0 1771 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms