RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 DNAJC17Q9NVM6 304 aaKnown RBP16.25■□□□□ 0.19
HMGA1-206ENST00000478214 ZSCAN32Q9NX65 697 aa16.25■□□□□ 0.19
HMGA1-206ENST00000478214 NOCTQ9UK39 431 aaKnown RBP16.25■□□□□ 0.19
HMGA1-206ENST00000478214 A0A0A0MRY4 1105 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 TBC1D3BA6NDS4 549 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 PROB1E7EW31 1015 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 ATG13O75143 517 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 GRAP2O75791 330 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 PENKP01210 267 aaPredicted RBP16.24■□□□□ 0.19
HMGA1-206ENST00000478214 CHRNB2P17787 502 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 MRE11P49959 708 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 PITX1P78337 314 aaPredicted RBP16.24■□□□□ 0.19
HMGA1-206ENST00000478214 DMWDQ09019 674 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 FYB2Q5VWT5 728 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 GRAMD4Q6IC98 578 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 OLFML1Q6UWY5 402 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 TAC4Q86UU9 113 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 FAM217AQ8IXS0 508 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 CPXM2Q8N436 756 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 TERB1Q8NA31 727 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 ZBTB44Q8NCP5 570 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 SERPINB11Q96P15 392 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 XPO6Q96QU8 1125 aaKnown RBP16.24■□□□□ 0.19
HMGA1-206ENST00000478214 TRIM62Q9BVG3 475 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 ASNSD1Q9NWL6 643 aa16.24■□□□□ 0.19
HMGA1-206ENST00000478214 ATG2BQ96BY7 2078 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 A0A1B0GTH6 734 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 TSPAN3O60637 253 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 LSM8O95777 96 aaKnown RBP16.23■□□□□ 0.19
HMGA1-206ENST00000478214 GLI1P08151 1106 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 CHRM1P11229 460 aaPredicted RBP16.23■□□□□ 0.19
HMGA1-206ENST00000478214 TNFRSF4P43489 277 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 FNTBP49356 437 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 SNX16P57768 344 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 FMO1Q01740 532 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 CDR2Q01850 454 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 SLC6A3Q01959 620 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 ARID5AQ03989 594 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 RING1Q06587 406 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 NNTQ13423 1086 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 FILIP1LQ4L180 1135 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 DCAF6Q58WW2 860 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 EFHC1Q5JVL4 640 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 EMC10Q5UCC4 262 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 HEATR6Q6AI08 1181 aaKnown RBP16.23■□□□□ 0.19
HMGA1-206ENST00000478214 ZC3H14Q6PJT7 736 aaKnown RBP16.23■□□□□ 0.19
HMGA1-206ENST00000478214 TOGARAM2Q6ZUX3 1019 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 ZNF677Q86XU0 584 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 DEFB106AQ8N104 65 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 CCDC26Q8TAB7 109 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 ATRIPQ8WXE1 791 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 CPA5Q8WXQ8 436 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 FCRL2Q96LA5 508 aaPredicted RBP16.23■□□□□ 0.19
HMGA1-206ENST00000478214 SLC2A13Q96QE2 648 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 FAM126AQ9BYI3 521 aaPredicted RBP16.23■□□□□ 0.19
HMGA1-206ENST00000478214 ZDHHC4Q9NPG8 344 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 STOML2Q9UJZ1 356 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 SLC8A2Q9UPR5 921 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 PCDHGA2Q9Y5H1 932 aa16.23■□□□□ 0.19
HMGA1-206ENST00000478214 GFRA2O00451 464 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 IRAK2O43187 625 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 HSF2BPO75031 334 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 LATS1O95835 1130 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 TRUB2O95900 331 aaKnown RBP16.22■□□□□ 0.19
HMGA1-206ENST00000478214 SERPINC1P01008 464 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 CISD3P0C7P0 127 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 TIE1P35590 1138 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 KIR2DL1P43626 348 aaPredicted RBP16.22■□□□□ 0.19
HMGA1-206ENST00000478214 PXNP49023 591 aaPredicted RBP16.22■□□□□ 0.19
HMGA1-206ENST00000478214 DGKGP49619 791 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 NRLP54845 237 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 TPM4P67936 248 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 NOMO3P69849 1222 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 MRPS21P82921 87 aaKnown RBP16.22■□□□□ 0.19
HMGA1-206ENST00000478214 PREPLQ4J6C6 727 aaPredicted RBP16.22■□□□□ 0.19
HMGA1-206ENST00000478214 C2CD6Q53TS8 623 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 C10orf76Q5T2E6 689 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 ADGRF1Q5T601 910 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 NAA35Q5VZE5 725 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 NUGGCQ68CJ6 796 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 SYT13Q7L8C5 426 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 SLC26A9Q7LBE3 791 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 ASCL5Q7RTU5 278 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 CACNA2D4Q7Z3S7 1137 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 ERICH1Q86X53 443 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 UNC45BQ8IWX7 931 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 CCDC33Q8N5R6 958 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 DDI1Q8WTU0 396 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 NKD2Q969F2 451 aaPredicted RBP16.22■□□□□ 0.19
HMGA1-206ENST00000478214 ACDQ96AP0 544 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 C18orf8Q96DM3 657 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 SLC39A13Q96H72 371 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 FBXO10Q9UK96 956 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 CLEC4EQ9ULY5 219 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 TLR6Q9Y2C9 796 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 USP34Q70CQ2 3546 aa16.22■□□□□ 0.19
HMGA1-206ENST00000478214 GOLGA6L7A0A1B0GV03 622 aa16.21■□□□□ 0.19
HMGA1-206ENST00000478214 ACSL4O60488 711 aa16.21■□□□□ 0.19
HMGA1-206ENST00000478214 LILRB5O75023 590 aa16.21■□□□□ 0.19
HMGA1-206ENST00000478214 CAVIN2O95810 425 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms