RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 SLC2A13Q96QE2 648 aa10.71□□□□□ -0.69
HDAC6-222ENST00000478095 SYT11Q9BT88 431 aa10.71□□□□□ -0.69
HDAC6-222ENST00000478095 TRIM62Q9BVG3 475 aa10.71□□□□□ -0.69
HDAC6-222ENST00000478095 TRIM5Q9C035 493 aa10.71□□□□□ -0.69
HDAC6-222ENST00000478095 RBM12Q9NTZ6 932 aaKnown RBP10.71□□□□□ -0.69
HDAC6-222ENST00000478095 TAS2R14Q9NYV8 317 aa10.71□□□□□ -0.69
HDAC6-222ENST00000478095 AIPL1Q9NZN9 384 aa10.71□□□□□ -0.69
HDAC6-222ENST00000478095 COX16Q9P0S2 106 aa10.71□□□□□ -0.69
HDAC6-222ENST00000478095 AGO1Q9UL18 857 aaKnown RBP10.71□□□□□ -0.69
HDAC6-222ENST00000478095 CAPN11Q9UMQ6 739 aa10.71□□□□□ -0.69
HDAC6-222ENST00000478095 LUC7L2Q9Y383 392 aaKnown RBP10.71□□□□□ -0.69
HDAC6-222ENST00000478095 SIT1Q9Y3P8 196 aa10.71□□□□□ -0.69
HDAC6-222ENST00000478095 HBS1LQ9Y450 684 aaKnown RBP10.71□□□□□ -0.69
HDAC6-222ENST00000478095 NUP210Q8TEM1 1887 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-222ENST00000478095 NEDD8-MDP1E9PL57 170 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 TRDMT1O14717 391 aaKnown RBP10.7□□□□□ -0.7
HDAC6-222ENST00000478095 DAB1O75553 588 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 TRUB2O95900 331 aaKnown RBP10.7□□□□□ -0.7
HDAC6-222ENST00000478095 MOCS2O96007 188 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-222ENST00000478095 ADH1CP00326 375 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 GLI1P08151 1106 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 ADH5P11766 374 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 GLULP15104 373 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 TNFAIP3P21580 790 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 AVPR2P30518 371 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 HARS2P49590 506 aaKnown RBP10.7□□□□□ -0.7
HDAC6-222ENST00000478095 TBX4P57082 545 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 CENPCQ03188 943 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 NR1H3Q13133 447 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 MMRN1Q13201 1228 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 GAB4Q2WGN9 574 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 ANO4Q32M45 955 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 SARM1Q6SZW1 724 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 BEND5Q7L4P6 421 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 C12orf40Q86WS4 652 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 ZDHHC17Q8IUH5 632 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 VSTM4Q8IW00 320 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 KIAA1958Q8N8K9 716 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 NAT16Q8N8M0 369 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 OTUB2Q96DC9 234 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 P2RY11Q96G91 374 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 MSANTD3Q96H12 275 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 FCRL2Q96LA5 508 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-222ENST00000478095 SERPINB11Q96P15 392 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 DCLK3Q9C098 648 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 FAM204AQ9H8W3 233 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 FBRSL1Q9HCM7 1045 aaKnown RBP10.7□□□□□ -0.7
HDAC6-222ENST00000478095 SPHK2Q9NRA0 654 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 METTL5Q9NRN9 209 aaKnown RBP10.7□□□□□ -0.7
HDAC6-222ENST00000478095 ASNSD1Q9NWL6 643 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 DDIT4Q9NX09 232 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 PLK2Q9NYY3 685 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 ADAM22Q9P0K1 906 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 MRPS17Q9Y2R5 130 aaKnown RBP10.7□□□□□ -0.7
HDAC6-222ENST00000478095 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.7□□□□□ -0.7
HDAC6-222ENST00000478095 MYO10Q9HD67 2058 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 MYO16Q9Y6X6 1858 aa10.7□□□□□ -0.7
HDAC6-222ENST00000478095 GOLGA6L7A0A1B0GV03 622 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 DDX3XO00571 662 aaKnown RBP eCLIP10.69□□□□□ -0.7
HDAC6-222ENST00000478095 IRAK2O43187 625 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 TSPAN3O60637 253 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 IGLV3-27P01718 113 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 PLEKP08567 350 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-222ENST00000478095 TFE3P19532 575 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-222ENST00000478095 FLT3P36888 993 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 PRKCIP41743 596 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 SLC6A11P48066 632 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 GALK1P51570 392 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 CLCN5P51795 746 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 MLLT6P55198 1093 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-222ENST00000478095 CDK17Q00537 523 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 GAD2Q05329 585 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 KDSRQ06136 332 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 MESP2Q0VG99 397 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 PTP4A2Q12974 167 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 NME3Q13232 169 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 HGSNATQ68CP4 663 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 FSTL4Q6MZW2 842 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 TRNP1Q6NT89 227 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 Q6ZS52 159 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 MON1BQ7L1V2 547 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 TMC6Q7Z403 805 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 PHF13Q86YI8 300 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-222ENST00000478095 EMC1Q8N766 993 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 IQCDQ96DY2 449 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 P2RY13Q9BPV8 354 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 BBS2Q9BXC9 721 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 ADAM33Q9BZ11 813 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 NUCKS1Q9H1E3 243 aaKnown RBP10.69□□□□□ -0.7
HDAC6-222ENST00000478095 CALCOCO1Q9P1Z2 691 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 XPO7Q9UIA9 1087 aaKnown RBP10.69□□□□□ -0.7
HDAC6-222ENST00000478095 TLR6Q9Y2C9 796 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 ZNF510Q9Y2H8 683 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 ARIH1Q9Y4X5 557 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-222ENST00000478095 PCDHGA10Q9Y5H3 936 aa10.69□□□□□ -0.7
HDAC6-222ENST00000478095 COL4A2P08572 1712 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 M0QYT0 321 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 TRIM24O15164 1050 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 HOXC11O43248 304 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-222ENST00000478095 EGFP01133 1207 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms