RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CCDC28AQ8IWP9 274 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 ELMOD2Q8IZ81 293 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 CCDC89Q8N998 374 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 LRRC57Q8N9N7 239 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 ANKRD53Q8N9V6 530 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 TBC1D15Q8TC07 691 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 ASIC4Q96FT7 647 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 ACAP3Q96P50 834 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 YME1L1Q96TA2 773 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 RMDN3Q96TC7 470 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 REEP2Q9BRK0 252 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 CLPBQ9H078 707 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 SCPEP1Q9HB40 452 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 KIAA1586Q9HCI6 787 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 C8orf4Q9NR00 106 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 GRHL1Q9NZI5 618 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 TCEAL9Q9UHQ7 104 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 AGO2Q9UKV8 859 aaKnown RBP13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 AFG3L2Q9Y4W6 797 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 UBIAD1Q9Y5Z9 338 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 PARP14Q460N5 1801 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 PHIPQ8WWQ0 1821 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 ARHGEF35A5YM69 484 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 ATP2A1O14983 1001 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 GMNNO75496 209 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 MYCP01106 439 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 WDR4P57081 412 aaKnown RBP13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 CACNB1Q02641 598 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 SELENBP1Q13228 472 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 MTMR1Q13613 665 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 ARHGEF16Q5VV41 709 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 B3GNT9Q6UX72 402 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 CATSPERGQ6ZRH7 1159 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 EPM2AIP1Q7L775 607 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 TAS2R42Q7RTR8 314 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 TMEM126BQ8IUX1 230 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 ULK2Q8IYT8 1036 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 GALNT4Q8N4A0 578 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 AFG1LQ8WV93 481 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 BAP1Q92560 729 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 EEF2KMTQ96G04 330 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 CEP19Q96LK0 163 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 HOXD1Q9GZZ0 328 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 NEK6Q9HC98 313 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 ABI2Q9NYB9 513 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 ANKFY1Q9P2R3 1169 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 SEPT3Q9UH03 358 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 ADAMTS5Q9UNA0 930 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 PCDHGA8Q9Y5G5 932 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 HEMK1Q9Y5R4 338 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 CSADQ9Y600 493 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 POLR2AP24928 1970 aaKnown RBP13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 UTRNP46939 3433 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 POLR1CO15160 346 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 ACOX3O15254 700 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 UGT1A9O60656 530 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 UGT1A6P19224 532 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 EIF2AK2P19525 551 aaKnown RBP13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 CD9P21926 228 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 UGT1A1P22309 533 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 UGT1A4P22310 534 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 FGFR4P22455 802 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 PEX2P28328 305 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 UGT1A3P35503 534 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 UGT1A5P35504 534 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 PRKCIP41743 596 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 STX1BP61266 288 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 MAPK7Q13164 816 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 PGM5Q15124 567 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 OGFRL1Q5TC84 451 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 CYP4A22Q5TCH4 519 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 ITPRIPL1Q6GPH6 555 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 RINT1Q6NUQ1 792 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 LRRC55Q6ZSA7 311 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 RRAGAQ7L523 313 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 JAMLQ86YT9 394 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 SYCE1Q8N0S2 351 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 CARNMT1Q8N4J0 409 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 CATSPER1Q8NEC5 780 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 CAPSLQ8WWF8 208 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 TRIM63Q969Q1 353 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 METTL2AQ96IZ6 378 aaKnown RBP13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 TAAR1Q96RJ0 339 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 TEX13BQ9BXU2 312 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 UGT1A7Q9HAW7 530 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 UGT1A10Q9HAW8 530 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 UGT1A8Q9HAW9 530 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 PXMP2Q9NR77 195 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 ZMYM2Q9UBW7 1377 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 SSC5DA1L4H1 1573 aa13.05□□□□□ -0.32
RTFDC1-207ENST00000477573 A0A0B4J203 849 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 PRPF4O43172 522 aaKnown RBP eCLIP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 CDH16O75309 829 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 USP2O75604 605 aaPredicted RBP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 MYO1DO94832 1006 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 FAM13AO94988 1023 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 P4HBP07237 508 aaKnown RBP13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 SRGAP2CP0DJJ0 459 aa13.04□□□□□ -0.32
RTFDC1-207ENST00000477573 SRGAP2BP0DMP2 458 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms