RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CBFA2T3O75081 653 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 VNN1O95497 513 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 PRB1P04280 392 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 CAPNS1P04632 268 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 SYT1P21579 422 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 CHKAP35790 457 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 CCT8P50990 548 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 AP3M2P53677 418 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 C21orf59P57076 290 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 SNRPFP62306 86 aaKnown RBP7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 DLG4P78352 724 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 BNC1Q01954 994 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 E2F5Q15329 346 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 KNOP1Q1ED39 458 aaKnown RBP7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 SGSM1Q2NKQ1 1148 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 KIF19Q2TAC6 998 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 INAVAQ3KP66 663 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 ZNF394Q53GI3 561 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 FOXD4L5Q5VV16 416 aaPredicted RBP7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 CEP135Q66GS9 1140 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 DHRS13Q6UX07 377 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 CLEC20AQ6ZU45 233 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 UNC13DQ70J99 1090 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 TMPRSS7Q7RTY8 843 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 GLRX5Q86SX6 157 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 DENND1CQ8IV53 801 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 IQUBQ8NA54 791 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 CCDC150Q8NCX0 1101 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 PLEKHO2Q8TD55 490 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 CYB5D2Q8WUJ1 264 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 FOXD4L4Q8WXT5 416 aaPredicted RBP7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 DNASE2BQ8WZ79 361 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 DUSP9Q99956 384 aaKnown RBP7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 DCLK3Q9C098 648 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 DNAI2Q9GZS0 605 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 LHX5Q9H2C1 402 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 CUEDC2Q9H467 287 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 C6orf106Q9H6K1 298 aaPredicted RBP7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 CSNK1G1Q9HCP0 422 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 SCUBE2Q9NQ36 999 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 KBTBD4Q9NVX7 518 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 ELOVL2Q9NXB9 296 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 IL37Q9NZH6 218 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 KIAA1522Q9P206 1035 aaPredicted RBP7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 THAP10Q9P2Z0 257 aaPredicted RBP7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 STRIP2Q9ULQ0 834 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 ZNF510Q9Y2H8 683 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 AK5Q9Y6K8 562 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 SLCO1B1Q9Y6L6 691 aa7.01□□□□□ -1.29
RTFDC1-206ENST00000477485 FREM2Q5SZK8 3169 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 CABIN1Q9Y6J0 2220 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 SETXQ7Z333 2677 aaKnown RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 COL5A1P20908 1838 aaPredicted RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 SLC12A8A0AV02 714 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 NPC1O15118 1278 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 POLR2DO15514 142 aaKnown RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 TNFSF14O43557 240 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 GREM1O60565 184 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 SEMA4FO95754 770 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 HLA-DRAP01903 254 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 C4BPAP04003 597 aaKnown RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 DNTTP04053 509 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 ZNF883P0CG24 379 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 ACSL1P33121 698 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 HNF1BP35680 557 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 GRK6P43250 576 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 ASPAP45381 313 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 PSEN1P49768 467 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 ZNF132P52740 706 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 COPAP53621 1224 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 CLDN6P56747 220 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 COG7P83436 770 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 SEMG2Q02383 582 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 C19orf57Q0VDD7 668 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 E2F4Q16254 413 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 BMT2Q1RMZ1 405 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 TTC31Q49AM3 519 aaPredicted RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 FYB2Q5VWT5 728 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 Q6ZNB5 142 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 LRRC69Q6ZNQ3 347 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 METTL3Q86U44 580 aaKnown RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 UNC93AQ86WB7 457 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 CEP57L1Q8IYX8 460 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 PDCD7Q8N8D1 485 aaKnown RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 OR2T3Q8NH03 318 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 GOLGA5Q8TBA6 731 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 BAHD1Q8TBE0 780 aaPredicted RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 PARD3BQ8TEW8 1205 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 ZNF396Q96N95 335 aaPredicted RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 TWNKQ96RR1 684 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 CDK5RAP1Q96SZ6 601 aaKnown RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 ARID3AQ99856 593 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 C7orf25Q9BPX7 421 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 NT5C1AQ9BXI3 368 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 BTBD1Q9H0C5 482 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 GZF1Q9H116 711 aaPredicted RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 VRTNQ9H8Y1 702 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 TM9SF3Q9HD45 589 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 EXOC1Q9NV70 894 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms