RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 RAB21Q9UL25 225 aa29.94■■■□□ 2.38
VEGFA-211ENST00000476772 ZNF487B1APH4 448 aa29.93■■■□□ 2.38
VEGFA-211ENST00000476772 GRM6O15303 877 aa29.93■■■□□ 2.38
VEGFA-211ENST00000476772 PTGIRP43119 386 aa29.93■■■□□ 2.38
VEGFA-211ENST00000476772 DHX34Q14147 1143 aaKnown RBP29.93■■■□□ 2.38
VEGFA-211ENST00000476772 LILRA6Q6PI73 481 aa29.93■■■□□ 2.38
VEGFA-211ENST00000476772 CCDC105Q8IYK2 499 aa29.93■■■□□ 2.38
VEGFA-211ENST00000476772 MRPL43Q8N983 215 aaKnown RBP29.93■■■□□ 2.38
VEGFA-211ENST00000476772 PCDH19Q8TAB3 1148 aa29.93■■■□□ 2.38
VEGFA-211ENST00000476772 TRAF3IP1Q8TDR0 691 aaPredicted RBP29.93■■■□□ 2.38
VEGFA-211ENST00000476772 SERPINB11Q96P15 392 aa29.93■■■□□ 2.38
VEGFA-211ENST00000476772 YBX2Q9Y2T7 364 aaKnown RBP29.93■■■□□ 2.38
VEGFA-211ENST00000476772 PCDHA11Q9Y5I1 949 aa29.93■■■□□ 2.38
VEGFA-211ENST00000476772 ZSCAN5CA6NGD5 496 aaPredicted RBP29.92■■■□□ 2.38
VEGFA-211ENST00000476772 KLRC2P26717 231 aa29.92■■■□□ 2.38
VEGFA-211ENST00000476772 TFDP2Q14188 446 aa29.92■■■□□ 2.38
VEGFA-211ENST00000476772 WDR93Q6P2C0 686 aa29.92■■■□□ 2.38
VEGFA-211ENST00000476772 PQLC3Q8N755 202 aa29.92■■■□□ 2.38
VEGFA-211ENST00000476772 RUNDC3BQ96NL0 473 aa29.92■■■□□ 2.38
VEGFA-211ENST00000476772 CWC15Q9P013 229 aaKnown RBP29.92■■■□□ 2.38
VEGFA-211ENST00000476772 SAE1Q9UBE0 346 aaPredicted RBP29.92■■■□□ 2.38
VEGFA-211ENST00000476772 TBX18O95935 607 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 GOT1P17174 413 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 EPHB3P54753 998 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 EFEMP1Q12805 493 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 PLD1Q13393 1074 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 TAF12Q16514 161 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 PDZD8Q8NEN9 1154 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 OVCA2Q8WZ82 227 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 MYRFLQ96LU7 910 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 CSPG4P5Q96PW8 444 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 TGS1Q96RS0 853 aaKnown RBP29.91■■■□□ 2.38
VEGFA-211ENST00000476772 OLA1Q9NTK5 396 aaKnown RBP29.91■■■□□ 2.38
VEGFA-211ENST00000476772 LIASO43766 372 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 PBX2P40425 430 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 OTUD4Q01804 1114 aaKnown RBP29.91■■■□□ 2.38
VEGFA-211ENST00000476772 GUCY2DQ02846 1103 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 CAMK1Q14012 370 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 C10orf120Q5SQS8 335 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 JAMLQ86YT9 394 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 TRMT2BQ96GJ1 504 aaKnown RBP29.91■■■□□ 2.38
VEGFA-211ENST00000476772 ZNF512Q96ME7 567 aaPredicted RBP29.91■■■□□ 2.38
VEGFA-211ENST00000476772 TRIM51Q9BSJ1 452 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 CCSER2Q9H7U1 834 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 ARHGEF38Q9NXL2 777 aa29.91■■■□□ 2.38
VEGFA-211ENST00000476772 PECAM1P16284 738 aaPredicted RBP29.9■■■□□ 2.38
VEGFA-211ENST00000476772 IRS1P35568 1242 aa29.9■■■□□ 2.38
VEGFA-211ENST00000476772 ARL4AP40617 200 aa29.9■■■□□ 2.38
VEGFA-211ENST00000476772 BRMS1LQ5PSV4 323 aa29.9■■■□□ 2.38
VEGFA-211ENST00000476772 SLC9A4Q6AI14 798 aa29.9■■■□□ 2.38
VEGFA-211ENST00000476772 FBXO38Q6PIJ6 1188 aa29.9■■■□□ 2.38
VEGFA-211ENST00000476772 ACTL9Q8TC94 416 aa29.9■■■□□ 2.38
VEGFA-211ENST00000476772 MICAL1Q8TDZ2 1067 aa29.9■■■□□ 2.38
VEGFA-211ENST00000476772 RUBCNQ92622 972 aa29.9■■■□□ 2.38
VEGFA-211ENST00000476772 SAMD11Q96NU1 681 aa29.9■■■□□ 2.38
VEGFA-211ENST00000476772 EPB41L5Q9HCM4 733 aa29.9■■■□□ 2.38
VEGFA-211ENST00000476772 RCOR3Q9P2K3 495 aaPredicted RBP29.9■■■□□ 2.38
VEGFA-211ENST00000476772 DNPEPQ9ULA0 475 aa29.9■■■□□ 2.38
VEGFA-211ENST00000476772 FAM72CH0Y354 149 aa29.89■■■□□ 2.38
VEGFA-211ENST00000476772 APOC4-APOC2K7ER74 178 aa29.89■■■□□ 2.38
VEGFA-211ENST00000476772 APOL1O14791 398 aa29.89■■■□□ 2.38
VEGFA-211ENST00000476772 CREB3O43889 395 aa29.89■■■□□ 2.38
VEGFA-211ENST00000476772 TLR5O60602 858 aa29.89■■■□□ 2.38
VEGFA-211ENST00000476772 APOC2P02655 101 aa29.89■■■□□ 2.38
VEGFA-211ENST00000476772 H2AFXP16104 143 aaPredicted RBP29.89■■■□□ 2.38
VEGFA-211ENST00000476772 CCR1P32246 355 aa29.89■■■□□ 2.38
VEGFA-211ENST00000476772 FAM72AQ5TYM5 149 aa29.89■■■□□ 2.38
VEGFA-211ENST00000476772 FAM72DQ6L9T8 149 aa29.89■■■□□ 2.38
VEGFA-211ENST00000476772 DNAJB7Q7Z6W7 309 aaPredicted RBP29.89■■■□□ 2.38
VEGFA-211ENST00000476772 FAM72BQ86X60 149 aa29.89■■■□□ 2.38
VEGFA-211ENST00000476772 TTC13Q8NBP0 860 aa29.89■■■□□ 2.38
VEGFA-211ENST00000476772 PSMG2Q969U7 264 aa29.89■■■□□ 2.38
VEGFA-211ENST00000476772 TLR6Q9Y2C9 796 aa29.89■■■□□ 2.38
VEGFA-211ENST00000476772 ESYT3A0FGR9 886 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 FAM187AA6NFU0 413 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 H3BRJ5 948 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 TUBBP07437 444 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 ERVK-21P61565 698 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 SEMA3BQ13214 749 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 PPP2R5DQ14738 602 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 SNX30Q5VWJ9 437 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 NPNTQ6UXI9 565 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 PLD5Q8N7P1 536 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 KREMEN2Q8NCW0 462 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 CCDC114Q96M63 670 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 GDF15Q99988 308 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 GDF3Q9NR23 364 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 RASAL2Q9UJF2 1139 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 SNX10Q9Y5X0 201 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 ZNF840PA6NDX5 716 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 GLUD1P00367 558 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 DRICH1Q6PGQ1 229 aaPredicted RBP29.88■■■□□ 2.37
VEGFA-211ENST00000476772 SLCO2A1Q92959 643 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 SLC39A13Q96H72 371 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 MARCH2Q9P0N8 246 aa29.88■■■□□ 2.37
VEGFA-211ENST00000476772 EEF2KO00418 725 aaKnown RBP29.87■■■□□ 2.37
VEGFA-211ENST00000476772 LPXNO60711 386 aa29.87■■■□□ 2.37
VEGFA-211ENST00000476772 ECEL1O95672 775 aa29.87■■■□□ 2.37
VEGFA-211ENST00000476772 C8AP07357 584 aa29.87■■■□□ 2.37
VEGFA-211ENST00000476772 AMPD1P23109 780 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms