RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CCDC42Q96M95 316 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 DDX23Q9BUQ8 820 aaKnown RBP30.77■■■□□ 2.52
HOXB3-208ENST00000476342 TMEM51Q9NW97 253 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 IMPACTQ9P2X3 320 aa30.77■■■□□ 2.52
HOXB3-208ENST00000476342 KRBA1A5PL33 1030 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 ANKRD62A6NC57 917 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 SIGLEC16A6NMB1 481 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 GOLGA6L6A8MZA4 724 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 AKR1B10O60218 316 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 ADH1CP00326 375 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 APOEP02649 317 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 CHKAP35790 457 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 SULT1E1P49888 294 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 SLC18A3Q16572 532 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 SLC25A52Q3SY17 297 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 IER5LQ5T953 404 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 SLC39A13Q96H72 371 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 NPY6RQ99463 290 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 NHEJ1Q9H9Q4 299 aaPredicted RBP30.76■■■□□ 2.51
HOXB3-208ENST00000476342 PARVAQ9NVD7 372 aa30.76■■■□□ 2.51
HOXB3-208ENST00000476342 AGO1Q9UL18 857 aaKnown RBP30.76■■■□□ 2.51
HOXB3-208ENST00000476342 SYNJ2BP-COX16A0A087WUM0 186 aa30.75■■■□□ 2.51
HOXB3-208ENST00000476342 M0QYT0 321 aa30.75■■■□□ 2.51
HOXB3-208ENST00000476342 DHCR24Q15392 516 aa30.75■■■□□ 2.51
HOXB3-208ENST00000476342 CCDC122Q5T0U0 273 aa30.75■■■□□ 2.51
HOXB3-208ENST00000476342 RALGPS2Q86X27 583 aaPredicted RBP30.75■■■□□ 2.51
HOXB3-208ENST00000476342 EMC1Q8N766 993 aa30.75■■■□□ 2.51
HOXB3-208ENST00000476342 NT5C3BQ969T7 300 aa30.75■■■□□ 2.51
HOXB3-208ENST00000476342 ZNF653Q96CK0 615 aa30.75■■■□□ 2.51
HOXB3-208ENST00000476342 FCRL2Q96LA5 508 aaPredicted RBP30.75■■■□□ 2.51
HOXB3-208ENST00000476342 CHP1Q99653 195 aa30.75■■■□□ 2.51
HOXB3-208ENST00000476342 MFSD1Q9H3U5 465 aa30.75■■■□□ 2.51
HOXB3-208ENST00000476342 GRPEL1Q9HAV7 217 aa30.75■■■□□ 2.51
HOXB3-208ENST00000476342 COX16Q9P0S2 106 aa30.75■■■□□ 2.51
HOXB3-208ENST00000476342 TCRBV5S1A1TA0A578 114 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 OTOL1A6NHN0 477 aaPredicted RBP30.74■■■□□ 2.51
HOXB3-208ENST00000476342 MAN2B1O00754 1011 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 F9P00740 461 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 CYP17A1P05093 508 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 SLC2A3P11169 496 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 PDGFRAP16234 1089 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 SDC4P31431 198 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 NME3Q13232 169 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 EIF4EBP2Q13542 120 aaPredicted RBP30.74■■■□□ 2.51
HOXB3-208ENST00000476342 DCUN1D2Q6PH85 259 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 SND1Q7KZF4 910 aaKnown RBP eCLIP30.74■■■□□ 2.51
HOXB3-208ENST00000476342 DNAAF5Q86Y56 855 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 PGAP3Q96FM1 320 aaPredicted RBP30.74■■■□□ 2.51
HOXB3-208ENST00000476342 CFAP57Q96MR6 1250 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 PANX2Q96RD6 677 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 SPHK2Q9NRA0 654 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 SLTMQ9NWH9 1034 aaKnown RBP eCLIP30.74■■■□□ 2.514e-9■□□□□ 11.2
HOXB3-208ENST00000476342 CNOT8Q9UFF9 292 aaKnown RBP30.74■■■□□ 2.51
HOXB3-208ENST00000476342 SCINQ9Y6U3 715 aa30.74■■■□□ 2.51
HOXB3-208ENST00000476342 SPECC1L-ADORA2AF8WAN1 911 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 CCR1P32246 355 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 CTHP32929 405 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 SLC11A2P49281 568 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 STARD6P59095 220 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 GFPT1Q06210 699 aaPredicted RBP30.73■■■□□ 2.51
HOXB3-208ENST00000476342 ASTE1Q2TB18 679 aaPredicted RBP30.73■■■□□ 2.51
HOXB3-208ENST00000476342 PLEKHA7Q6IQ23 1121 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 JOSD2Q8TAC2 188 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 RXFP2Q8WXD0 754 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 RNF34Q969K3 372 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 AZIN2Q96A70 460 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 MCEEQ96PE7 176 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 C2CD4BA6NLJ0 364 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 GJB6O95452 261 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 GJA4P35212 333 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 SOX9P48436 509 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 ZC3H12AQ5D1E8 599 aaKnown RBP30.73■■■□□ 2.51
HOXB3-208ENST00000476342 LY6G5CQ5SRR4 150 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 TRNP1Q6NT89 227 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 RHBDF2Q6PJF5 856 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 ZNF852Q6ZMS4 543 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 CPXM2Q8N436 756 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 SPC24Q8NBT2 197 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 EXOC4Q96A65 974 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 TBCBQ99426 244 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 SLC12A6Q9UHW9 1150 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 PAXBP1Q9Y5B6 917 aa30.73■■■□□ 2.51
HOXB3-208ENST00000476342 F5P12259 2224 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 MYOFQ9NZM1 2061 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 ATMINO43313 823 aaPredicted RBP30.72■■■□□ 2.51
HOXB3-208ENST00000476342 ADH5P11766 374 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 ABCB4P21439 1286 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 RFC1P35251 1148 aaPredicted RBP30.72■■■□□ 2.51
HOXB3-208ENST00000476342 GAD2Q05329 585 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 DEUP1Q05D60 604 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 MTA1Q13330 715 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 MAMLD1Q13495 774 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 PPP1R15BQ5SWA1 713 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 ADGRF1Q5T601 910 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 OTUD1Q5VV17 481 aaPredicted RBP30.72■■■□□ 2.51
HOXB3-208ENST00000476342 ATP6V0D2Q8N8Y2 350 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 C1QTNF1Q9BXJ1 281 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 MRPL47Q9HD33 250 aaKnown RBP30.72■■■□□ 2.51
HOXB3-208ENST00000476342 STOML2Q9UJZ1 356 aa30.72■■■□□ 2.51
HOXB3-208ENST00000476342 NENFQ9UMX5 172 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms