RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 DNAJB4Q9UDY4 337 aa19.78■□□□□ 0.76
SYF2-204ENST00000476231 EXOC1LA0A1B0GW35 172 aa19.77■□□□□ 0.76
SYF2-204ENST00000476231 DNAJC8O75937 253 aaPredicted RBP19.77■□□□□ 0.76
SYF2-204ENST00000476231 OAZ2O95190 189 aa19.77■□□□□ 0.76
SYF2-204ENST00000476231 BDNFP23560 247 aa19.77■□□□□ 0.76
SYF2-204ENST00000476231 DPYSL2Q16555 572 aa19.77■□□□□ 0.76
SYF2-204ENST00000476231 C4orf50Q6ZRC1 276 aa19.77■□□□□ 0.76
SYF2-204ENST00000476231 GPRIN1Q7Z2K8 1008 aa19.77■□□□□ 0.76
SYF2-204ENST00000476231 BNIPLQ7Z465 357 aa19.77■□□□□ 0.76
SYF2-204ENST00000476231 PRUNE1Q86TP1 453 aa19.77■□□□□ 0.76
SYF2-204ENST00000476231 LRRTM3Q86VH5 581 aa19.77■□□□□ 0.76
SYF2-204ENST00000476231 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.77■□□□□ 0.76
SYF2-204ENST00000476231 TMEM209Q96SK2 561 aa19.77■□□□□ 0.76
SYF2-204ENST00000476231 TMEM121Q9BTD3 319 aa19.77■□□□□ 0.76
SYF2-204ENST00000476231 GPATCH2LQ9NWQ4 482 aa19.77■□□□□ 0.76
SYF2-204ENST00000476231 CEP350Q5VT06 3117 aa19.77■□□□□ 0.76
SYF2-204ENST00000476231 NRP1O14786 923 aa19.77■□□□□ 0.75
SYF2-204ENST00000476231 PRPF4O43172 522 aaKnown RBP eCLIP19.77■□□□□ 0.75
SYF2-204ENST00000476231 TADA2AO75478 443 aa19.77■□□□□ 0.75
SYF2-204ENST00000476231 ZBED1O96006 694 aa19.77■□□□□ 0.75
SYF2-204ENST00000476231 IL4RP24394 825 aa19.77■□□□□ 0.75
SYF2-204ENST00000476231 FAAP100Q0VG06 881 aa19.77■□□□□ 0.75
SYF2-204ENST00000476231 TRABD2AQ86V40 505 aa19.77■□□□□ 0.75
SYF2-204ENST00000476231 PSTKQ8IV42 348 aaKnown RBP19.77■□□□□ 0.75
SYF2-204ENST00000476231 SCML4Q8N228 414 aa19.77■□□□□ 0.75
SYF2-204ENST00000476231 IRGQQ8WZA9 623 aa19.77■□□□□ 0.75
SYF2-204ENST00000476231 GRAMD1AQ96CP6 724 aa19.77■□□□□ 0.75
SYF2-204ENST00000476231 FAF2Q96CS3 445 aa19.77■□□□□ 0.75
SYF2-204ENST00000476231 ELAC2Q9BQ52 826 aaKnown RBP19.77■□□□□ 0.75
SYF2-204ENST00000476231 RHOBTB2Q9BYZ6 727 aa19.77■□□□□ 0.75
SYF2-204ENST00000476231 SAE1Q9UBE0 346 aaPredicted RBP19.77■□□□□ 0.75
SYF2-204ENST00000476231 PRG3Q9Y2Y8 225 aaPredicted RBP19.77■□□□□ 0.75
SYF2-204ENST00000476231 E7ESA3 106 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 SYN3O14994 580 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 RASSF9O75901 435 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 ETS1P14921 441 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 CREB1P16220 341 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 GCAP28676 217 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 STIP1P31948 543 aaKnown RBP19.76■□□□□ 0.75
SYF2-204ENST00000476231 SCTRP47872 440 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 IFNAR2P48551 515 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 MNX1P50219 401 aaPredicted RBP19.76■□□□□ 0.75
SYF2-204ENST00000476231 ATXN1P54253 815 aaKnown RBP19.76■□□□□ 0.75
SYF2-204ENST00000476231 CA9Q16790 459 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 C1orf53Q5VUE5 145 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 CRIPAKQ8N1N5 446 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 SCLYQ96I15 445 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 NRDE2Q9H7Z3 1164 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 SSU72Q9NP77 194 aaKnown RBP19.76■□□□□ 0.75
SYF2-204ENST00000476231 ZMYND8Q9ULU4 1186 aaPredicted RBP19.76■□□□□ 0.75
SYF2-204ENST00000476231 AP4E1Q9UPM8 1137 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 SMG5Q9UPR3 1016 aaKnown RBP19.76■□□□□ 0.75
SYF2-204ENST00000476231 USP15Q9Y4E8 981 aaPredicted RBP19.76■□□□□ 0.75
SYF2-204ENST00000476231 NLRC5Q86WI3 1866 aa19.76■□□□□ 0.75
SYF2-204ENST00000476231 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.75■□□□□ 0.75
SYF2-204ENST00000476231 RASA4BC9J798 803 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 MCF2LO15068 1137 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 RASA4O43374 803 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 TGM2P21980 687 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 PTPRDP23468 1912 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 L1CAMP32004 1257 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 RABGGTBP53611 331 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 ARL4CP56559 192 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 MPP2Q14168 576 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 HIF1AQ16665 826 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 TCTN1Q2MV58 587 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 OTUD1Q5VV17 481 aaPredicted RBP19.75■□□□□ 0.75
SYF2-204ENST00000476231 HFE2Q6ZVN8 426 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 NPAS4Q8IUM7 802 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 SPATA2LQ8IUW3 424 aaPredicted RBP19.75■□□□□ 0.75
SYF2-204ENST00000476231 NAT8LQ8N9F0 302 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 RSAD2Q8WXG1 361 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 MRPL9Q9BYD2 267 aaKnown RBP19.75■□□□□ 0.75
SYF2-204ENST00000476231 RRN3Q9NYV6 651 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.75■□□□□ 0.75
SYF2-204ENST00000476231 FAM47DPA6NHR8 397 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 YJEFN3A6XGL0 299 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 E7ENQ6 273 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 APOL1O14791 398 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 CAPN9O14815 690 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 SUN1O94901 812 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 LTFP02788 710 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 USP17L7P0C7H9 530 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 HNRNPH1P31943 449 aaKnown RBP19.75■□□□□ 0.75
SYF2-204ENST00000476231 STX2P32856 288 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 PHBP35232 272 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 EIF3EP60228 445 aaKnown RBP19.75■□□□□ 0.75
SYF2-204ENST00000476231 XRCC4Q13426 336 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 NOMO1Q15155 1222 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 SYPL2Q5VXT5 272 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 SLC9A4Q6AI14 798 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 PM20D1Q6GTS8 502 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 SRRM1Q8IYB3 904 aaKnown RBP19.75■□□□□ 0.75
SYF2-204ENST00000476231 DCP1BQ8IZD4 617 aaKnown RBP19.75■□□□□ 0.75
SYF2-204ENST00000476231 COLEC11Q9BWP8 271 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 ZCWPW1Q9H0M4 648 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 DHX35Q9H5Z1 703 aaKnown RBP19.75■□□□□ 0.75
SYF2-204ENST00000476231 ADAM28Q9UKQ2 775 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 FZD10Q9ULW2 581 aa19.75■□□□□ 0.75
SYF2-204ENST00000476231 SCN5AQ14524 2016 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms