RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 TFAP2BQ92481 460 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 TIFAQ96CG3 184 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 FAF2Q96CS3 445 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 LRRC39Q96DD0 335 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 APOPT1Q96IL0 206 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 NSL1Q96IY1 281 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 ZBTB45Q96K62 511 aaPredicted RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 GUCD1Q96NT3 240 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 CYTH2Q99418 400 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 PCYT2Q99447 389 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 PAFAH2Q99487 392 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 SH2D3AQ9BRG2 576 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 NIF3L1Q9GZT8 377 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 POLR3FQ9H1D9 316 aaPredicted RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 MANSC1Q9H8J5 431 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 IL23AQ9NPF7 189 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 ARL8BQ9NVJ2 186 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 KCNK4Q9NYG8 393 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 RBAKQ9NYW8 714 aaPredicted RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 SLC9A2Q9UBY0 812 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 ZNF212Q9UDV6 495 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 CYTH4Q9UIA0 394 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 CDV3Q9UKY7 258 aaKnown RBP7.13□□□□□ -1.27
UBR4-212ENST00000475973 SORCS3Q9UPU3 1222 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 ZNF148Q9UQR1 794 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 LRCH1Q9Y2L9 728 aa7.13□□□□□ -1.27
UBR4-212ENST00000475973 LAMA3Q16787 3333 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 GSTTP1A0A1W2PQM5 241 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 PI4K2BG5E9Z4 385 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 BIRC5O15392 142 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 RFPL1O75677 317 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 CBX6O95503 412 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 FGBP02675 491 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 KRT1P04264 644 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 CAPNS1P04632 268 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 TROVE2P10155 538 aaKnown RBP eCLIP7.12□□□□□ -1.27
UBR4-212ENST00000475973 KRT15P19012 456 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 IL4RP24394 825 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 ADRA1DP25100 572 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 SSTR1P30872 391 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 CYP2C18P33260 490 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 RFC2P35250 354 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 RFC1P35251 1148 aaPredicted RBP7.12□□□□□ -1.27
UBR4-212ENST00000475973 VHLP40337 213 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 LIG4P49917 911 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 CCNHP51946 323 aaPredicted RBP7.12□□□□□ -1.27
UBR4-212ENST00000475973 CCL23P55773 120 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 RPL26P61254 145 aaKnown RBP7.12□□□□□ -1.27
UBR4-212ENST00000475973 YWHAEP62258 255 aaKnown RBP7.12□□□□□ -1.27
UBR4-212ENST00000475973 OTUD4Q01804 1114 aaKnown RBP7.12□□□□□ -1.27
UBR4-212ENST00000475973 SATB1Q01826 763 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 SP2Q02086 613 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 KCNC4Q03721 635 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 GAD2Q05329 585 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 PTPN11Q06124 597 aaPredicted RBP7.12□□□□□ -1.27
UBR4-212ENST00000475973 POU5F1BQ06416 359 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 AP1B1Q10567 949 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 TUBB3Q13509 450 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 BFSP2Q13515 415 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 GSTA3Q16772 222 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 SWI5Q1ZZU3 235 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 NBPF20Q3BBV1 942 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 TMEM240Q5SV17 173 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 CES4AQ5XG92 561 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 SWSAP1Q6NVH7 229 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 PGM2L1Q6PCE3 622 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 C3orf62Q6ZUJ4 267 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 MTDHQ86UE4 582 aaKnown RBP7.12□□□□□ -1.27
UBR4-212ENST00000475973 XYLT1Q86Y38 959 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 MYLK4Q86YV6 388 aaPredicted RBP7.12□□□□□ -1.27
UBR4-212ENST00000475973 IGDCC3Q8IVU1 814 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.12□□□□□ -1.27
UBR4-212ENST00000475973 UNC45BQ8IWX7 931 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 ZBED8Q8IZ13 594 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 SIX5Q8N196 739 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 C4orf33Q8N1A6 199 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 MAFAQ8NHW3 353 aaPredicted RBP7.12□□□□□ -1.27
UBR4-212ENST00000475973 TTC8Q8TAM2 541 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 HERVK_113Q902F9 699 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 ELMO3Q96BJ8 720 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 SERAC1Q96JX3 654 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 FAM84AQ96KN4 292 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 NUDCD1Q96RS6 583 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 FNBP1Q96RU3 617 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 CDX2Q99626 313 aaPredicted RBP7.12□□□□□ -1.27
UBR4-212ENST00000475973 ACO2Q99798 780 aaKnown RBP7.12□□□□□ -1.27
UBR4-212ENST00000475973 SYT15Q9BQS2 421 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 SIKE1Q9BRV8 207 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 TMEM121Q9BTD3 319 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 KATNAL1Q9BW62 490 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 NFKBIZQ9BYH8 718 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 TRIM55Q9BYV6 548 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 IMPG2Q9BZV3 1241 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 TRPV6Q9H1D0 765 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 FZD8Q9H461 694 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 GPAMQ9HCL2 828 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 JPH1Q9HDC5 661 aaPredicted RBP7.12□□□□□ -1.27
UBR4-212ENST00000475973 KRT82Q9NSB4 513 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 CISHQ9NSE2 258 aa7.12□□□□□ -1.27
UBR4-212ENST00000475973 SLC17A7Q9P2U7 560 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms