RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 PREPLQ4J6C6 727 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-207ENST00000475549 TCERG1LQ5VWI1 586 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 DAB2IPQ5VWQ8 1189 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 BSPRYQ5W0U4 402 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 TTI2Q6NXR4 508 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 PMF1Q6P1K2 205 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 NUDT18Q6ZVK8 323 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 TRMT11Q7Z4G4 463 aaKnown RBP7.35□□□□□ -1.23
HDAC3-207ENST00000475549 TADA2BQ86TJ2 420 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 FMNL3Q8IVF7 1028 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 ABCA7Q8IZY2 2146 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 CPXM2Q8N436 756 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 TTC39CQ8N584 583 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 TRIML1Q8N9V2 468 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 KCTD13Q8WZ19 329 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 EDEM1Q92611 657 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 MYEOVQ96EZ4 313 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 SPACA7Q96KW9 195 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 TIGD1Q96MW7 591 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 TMEM121BQ9BXQ6 578 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-207ENST00000475549 FAM124BQ9H5Z6 455 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-207ENST00000475549 TMEM9BQ9NQ34 198 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 ITM2CQ9NQX7 267 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 RMND1Q9NWS8 449 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 ARMCX3Q9UH62 379 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-207ENST00000475549 STOML2Q9UJZ1 356 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 MAN1B1Q9UKM7 699 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 ANGPTL2Q9UKU9 493 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 CYP8B1Q9UNU6 501 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 CNOT1A5YKK6 2376 aaKnown RBP7.35□□□□□ -1.23
HDAC3-207ENST00000475549 EML5Q05BV3 1969 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 GOLGA6L7A0A1B0GV03 622 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 C1QTNF9BB2RNN3 333 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 PMM2O15305 246 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 AP5Z1O43299 807 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 MSI1O43347 362 aaKnown RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 TSPAN3O60637 253 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 GADD45BO75293 160 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 ZNF217O75362 1048 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 FYNP06241 537 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 SERPINF2P08697 491 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 C1QTNF9P0C862 333 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 C7P10643 843 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 VDRP11473 427 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 CEACAM1P13688 526 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 CD19P15391 556 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 TRIM21P19474 475 aaKnown RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 CSRP1P21291 193 aaKnown RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 HOXD9P28356 352 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 HLA-FP30511 346 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 CHKAP35790 457 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 FMO5P49326 533 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 RGS7P49802 495 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 TPMTP51580 245 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 COPAP53621 1224 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 BCAT1P54687 386 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 LRRC63Q05C16 580 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 ADIGQ0VDE8 80 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 BST2Q10589 180 aaKnown RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 LMAN2Q12907 356 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 SEMA3BQ13214 749 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 BYSLQ13895 437 aaKnown RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 ZNF234Q14588 700 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 ST3GAL2Q16842 350 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 PTPRNQ16849 979 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 DUOXA1Q1HG43 343 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 UAP1L1Q3KQV9 507 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 SGO2Q562F6 1265 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 NADSYN1Q6IA69 706 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 SDE2Q6IQ49 451 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 TMEM270Q6UE05 265 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 LCLAT1Q6UWP7 414 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 RSRC2Q7L4I2 434 aaKnown RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 RRAGAQ7L523 313 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 KIAA0907Q7Z7F0 614 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 PIP4P1Q86T03 277 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 METTL3Q86U44 580 aaKnown RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 ADIPOR2Q86V24 386 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 ARHGEF19Q8IW93 802 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 ELOA2Q8IYF1 753 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 ARHGAP18Q8N392 663 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 DEFB124Q8NES8 71 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 CLEC4CQ8WTT0 213 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 DDI1Q8WTU0 396 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 SMARCE1Q969G3 411 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 DHTKD1Q96HY7 919 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 LMLNQ96KR4 655 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 HSPA12BQ96MM6 686 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 MED15Q96RN5 788 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 CDK5RAP1Q96SZ6 601 aaKnown RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 DCLK3Q9C098 648 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 ELOVL2Q9NXB9 296 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 WSB2Q9NYS7 404 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 USP36Q9P275 1121 aaKnown RBP7.34□□□□□ -1.23
HDAC3-207ENST00000475549 SLC6A14Q9UN76 642 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 ZNF510Q9Y2H8 683 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 SLCO1B1Q9Y6L6 691 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 FREM2Q5SZK8 3169 aa7.34□□□□□ -1.23
HDAC3-207ENST00000475549 AKAP13Q12802 2813 aa7.33□□□□□ -1.24
HDAC3-207ENST00000475549 CHD6Q8TD26 2715 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms