RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 ZNF334Q9HCZ1 680 aaPredicted RBP10.75□□□□□ -0.69
COL12A1-206ENST00000474564 DNMT3BQ9UBC3 853 aaKnown RBP10.75□□□□□ -0.69
COL12A1-206ENST00000474564 SFMBT1Q9UHJ3 866 aa10.75□□□□□ -0.69
COL12A1-206ENST00000474564 GOLGA6L10A0A0M3HER8 536 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 MDM4O15151 490 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 COCHO43405 550 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 CEP104O60308 925 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 TJP3O95049 919 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 ATP1A1P05023 1023 aaKnown RBP10.74□□□□□ -0.69
COL12A1-206ENST00000474564 FYNP06241 537 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 HTR7P34969 479 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 CDH6P55285 790 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 HDAC4P56524 1084 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 WHAMMP3Q1A5X7 153 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 TXNDC8Q6A555 127 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 BZW1Q7L1Q6 419 aaKnown RBP10.74□□□□□ -0.69
COL12A1-206ENST00000474564 BHLHA9Q7RTU4 235 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 C12orf76Q8N812 135 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-206ENST00000474564 MYRIPQ8NFW9 859 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 E2F7Q96AV8 911 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 PABPC5Q96DU9 382 aaKnown RBP10.74□□□□□ -0.69
COL12A1-206ENST00000474564 CAPZA3Q96KX2 299 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 FAM161BQ96MY7 647 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 OSBPL9Q96SU4 736 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 FERMT1Q9BQL6 677 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 TLR10Q9BXR5 811 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 TTYH1Q9H313 450 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-206ENST00000474564 GOLPH3Q9H4A6 298 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 CCSER2Q9H7U1 834 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 HOMER3Q9NSC5 361 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 CDC23Q9UJX2 597 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 NUDT5Q9UKK9 219 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 AP4E1Q9UPM8 1137 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 FAM50BQ9Y247 325 aa10.74□□□□□ -0.69
COL12A1-206ENST00000474564 ZFP37Q9Y6Q3 630 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-206ENST00000474564 CTAGE15A4D2H0 777 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 KCNU1A8MYU2 1149 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 SLC9A3R1O14745 358 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-206ENST00000474564 LATS1O95835 1130 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 OAS1P00973 400 aaKnown RBP10.73□□□□□ -0.69
COL12A1-206ENST00000474564 HMBSP08397 361 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 CTAGE8P0CG41 777 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 RARAP10276 462 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 CHKAP35790 457 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 TUBB4BP68371 445 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 SLC7A9P82251 487 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 CYP4F8P98187 520 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 ZNF252P-AS1Q0IIN9 211 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 KCNC3Q14003 757 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 TEAD2Q15562 447 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 PPP2R5EQ16537 467 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 ZC3H12AQ5D1E8 599 aaKnown RBP10.73□□□□□ -0.69
COL12A1-206ENST00000474564 TFDP3Q5H9I0 405 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 PPP6R3Q5H9R7 873 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-206ENST00000474564 SH3PXD2AQ5TCZ1 1133 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 GAREM2Q75VX8 874 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 CTAGE6Q86UF2 777 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 VSIG1Q86XK7 387 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 TMC8Q8IU68 726 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 CTAGE4Q8IX94 777 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 CMTM8Q8IZV2 173 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 ARL14EPQ8N8R7 260 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-206ENST00000474564 TTC13Q8NBP0 860 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 CD101Q93033 1021 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 AZIN2Q96A70 460 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 C1orf74Q96LT6 269 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 CARD6Q9BX69 1037 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 LRRC3Q9BY71 257 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 SIK2Q9H0K1 926 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 OSBPL2Q9H1P3 480 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 CATSPERBQ9H7T0 1116 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 KIF9Q9HAQ2 790 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 IL21Q9HBE4 155 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 WDR6Q9NNW5 1121 aaKnown RBP10.73□□□□□ -0.69
COL12A1-206ENST00000474564 PIGVQ9NUD9 493 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.73□□□□□ -0.69
COL12A1-206ENST00000474564 HCFC1R1Q9NWW0 138 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 THG1LQ9NWX6 298 aaKnown RBP10.73□□□□□ -0.69
COL12A1-206ENST00000474564 OSER1Q9NX31 292 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 GDE1Q9NZC3 331 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 RCOR3Q9P2K3 495 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-206ENST00000474564 TBC1D14Q9P2M4 693 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 FZD10Q9ULW2 581 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 PACSIN2Q9UNF0 486 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-206ENST00000474564 EFR3BQ9Y2G0 817 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 MRFAP1Q9Y605 127 aa10.73□□□□□ -0.69
COL12A1-206ENST00000474564 PTPRDP23468 1912 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 C2orf78A6NCI8 922 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 ZNF487B1APH4 448 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 F5H5T6 163 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 PGRMC1O00264 195 aaKnown RBP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 EEF2KO00418 725 aaKnown RBP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 MSI1O43347 362 aaKnown RBP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 CREB3O43889 395 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 ZNF189O75820 626 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 TBX18O95935 607 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 MOCS2O96007 188 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 IGLV3-25P01717 112 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 CYBBP04839 570 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 FOSL2P15408 326 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms