RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 SNX1Q13596 522 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 PLCB4Q15147 1175 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 STILQ15468 1287 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 UAP1Q16222 522 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 LY6KQ17RY6 165 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 GAB4Q2WGN9 574 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 GKAP1Q5VSY0 366 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 SPOPLQ6IQ16 392 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 EFCAB12Q6NXP0 572 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 FBXL19Q6PCT2 694 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 CRELD2Q6UXH1 353 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 CCDC121Q6ZUS5 278 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 CPLX4Q7Z7G2 160 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 PCGF5Q86SE9 256 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 NLRP14Q86W24 1093 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 NT5DC4Q86YG4 428 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 PASD1Q8IV76 773 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 CACNA2D3Q8IZS8 1091 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 RIBC1Q8N443 379 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 GPRC5AQ8NFJ5 357 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 FBXO25Q8TCJ0 367 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF606Q8WXB4 792 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 CENPTQ96BT3 561 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 CDCA5Q96FF9 252 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 CFAP57Q96MR6 1250 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 SERPINB12Q96P63 405 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 NFKBIZQ9BYH8 718 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 DCLK3Q9C098 648 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 MTMR12Q9C0I1 747 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 CCDC113Q9H0I3 377 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 ASB7Q9H672 318 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 ERVK-5Q9HDB9 667 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 CISHQ9NSE2 258 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 ZDHHC18Q9NUE0 388 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 GPATCH2Q9NW75 528 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 SLAMF8Q9P0V8 285 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 SAMD15Q9P1V8 674 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 KIAA1257Q9ULG3 409 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 TNFSF13BQ9Y275 285 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 NUB1Q9Y5A7 615 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 PARP14Q460N5 1801 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 MROH7Q68CQ1 1323 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 CNTNAP2Q9UHC6 1331 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 LOC285556D6RIA3 1793 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 PCNTO95613 3336 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 COL11A1P12107 1806 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 IGKV6-21A0A0C4DH24 114 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 FAM170AA1A519 330 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 LRRD1A4D1F6 860 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 SMIM23A6NLE4 172 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 WASH4PA8MWX3 477 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 H0YGN5 161 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 RIPK2O43353 540 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 GREM1O60565 184 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 MSCO60682 206 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 DNAJA2O60884 412 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 DDNO94850 711 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 PGK2P07205 417 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 RALAP11233 206 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 ATP2A2P16615 1042 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 MMP8P22894 467 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 PSMA2P25787 234 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 PHBP35232 272 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 PTPN7P35236 360 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 GCLCP48506 637 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF132P52740 706 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 CORO7P57737 925 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 MYL6P60660 151 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 RBP5P82980 135 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 GUCY1A3Q02108 690 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 STAT4Q14765 748 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 ACAP1Q15027 740 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 PCBP1Q15365 356 aaKnown RBP eCLIP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 TRADDQ15628 312 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 FAM187BQ17R55 369 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 DCAF4L1Q3SXM0 396 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 TFDP3Q5H9I0 405 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 RNF187Q5TA31 235 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 IZUMO3Q5VZ72 239 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 TTC19Q6DKK2 380 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 DRICH1Q6PGQ1 229 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 ZDHHC24Q6UX98 284 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 SCARA5Q6ZMJ2 495 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 POLNQ7Z5Q5 900 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 YTHDF3Q7Z739 585 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 MAP7D3Q8IWC1 876 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 FBXO16Q8IX29 292 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 THNSL1Q8IYQ7 743 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 LRRC71Q8N4P6 559 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 BHLHE22Q8NFJ8 381 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 NLGN2Q8NFZ4 835 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 OR2W6PQ8NHA6 318 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 BAHD1Q8TBE0 780 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF473Q8WTR7 871 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 C1orf54Q8WWF1 131 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 OPTNQ96CV9 577 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 CHMP6Q96FZ7 201 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 ZBTB45Q96K62 511 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms