RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 ACOX2Q99424 681 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 TSG101Q99816 390 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 METTL14Q9HCE5 456 aaKnown RBP14.19□□□□□ -0.14
CHD3-209ENST00000473376 USP36Q9P275 1121 aaKnown RBP14.19□□□□□ -0.14
CHD3-209ENST00000473376 AGO1Q9UL18 857 aaKnown RBP14.19□□□□□ -0.14
CHD3-209ENST00000473376 CIZ1Q9ULV3 898 aaPredicted RBP14.19□□□□□ -0.14
CHD3-209ENST00000473376 STON1Q9Y6Q2 735 aa14.19□□□□□ -0.14
CHD3-209ENST00000473376 CEP295Q9C0D2 2601 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 USP24Q9UPU5 2620 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 TNRC6BQ9UPQ9 1833 aaKnown RBP14.18□□□□□ -0.14
CHD3-209ENST00000473376 OPHN1O60890 802 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 NDUFS2O75306 463 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 SMC2O95347 1197 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 SETSIPP0DME0 302 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 VDRP11473 427 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 CD6P30203 668 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 CORO1AP31146 461 aaKnown RBP14.18□□□□□ -0.14
CHD3-209ENST00000473376 HARS2P49590 506 aaKnown RBP14.18□□□□□ -0.14
CHD3-209ENST00000473376 TKTL1P51854 596 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 BST2Q10589 180 aaKnown RBP14.18□□□□□ -0.14
CHD3-209ENST00000473376 CUL2Q13617 745 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 SMYD5Q6GMV2 418 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 RSRC2Q7L4I2 434 aaKnown RBP14.18□□□□□ -0.14
CHD3-209ENST00000473376 ANKS1BQ7Z6G8 1248 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 TRIML1Q8N9V2 468 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 RBBP8NLQ8NC74 664 aaPredicted RBP14.18□□□□□ -0.14
CHD3-209ENST00000473376 JAKMIP2Q96AA8 810 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 TIGD1Q96MW7 591 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 FBRSQ9HAH7 460 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 ZDHHC4Q9NPG8 344 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 CNGB3Q9NQW8 809 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 ELOVL2Q9NXB9 296 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 WSB2Q9NYS7 404 aaPredicted RBP14.18□□□□□ -0.14
CHD3-209ENST00000473376 HESX1Q9UBX0 185 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 HOOK1Q9UJC3 728 aaKnown RBP14.18□□□□□ -0.14
CHD3-209ENST00000473376 NEUROG3Q9Y4Z2 214 aa14.18□□□□□ -0.14
CHD3-209ENST00000473376 GIPC1O14908 333 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 MDM4O15151 490 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 CFIP05156 583 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 PAEPP09466 180 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 PRCPP42785 496 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 EFEMP1Q12805 493 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 STILQ15468 1287 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 UAP1L1Q3KQV9 507 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 MPPE1Q53F39 396 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 ZNF394Q53GI3 561 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 SGO2Q562F6 1265 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 UNQ6494/PRO21346Q6UXR6 183 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 ARMCX6Q7L4S7 300 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 SLC41A1Q8IVJ1 513 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 FMR1NBQ8N0W7 255 aaPredicted RBP14.17□□□□□ -0.14
CHD3-209ENST00000473376 WFIKKN2Q8TEU8 576 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 AZIN2Q96A70 460 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 HSPA12BQ96MM6 686 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 ADAM33Q9BZ11 813 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 GOLPH3LQ9H4A5 285 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 PRDM16Q9HAZ2 1276 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 LRRC4Q9HBW1 653 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 ABCC13Q9NSE7 274 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 CACNA2D2Q9NY47 1150 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 ARMCX3Q9UH62 379 aaPredicted RBP14.17□□□□□ -0.14
CHD3-209ENST00000473376 RASAL2Q9UJF2 1139 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 NUDT5Q9UKK9 219 aa14.17□□□□□ -0.14
CHD3-209ENST00000473376 P4HA2O15460 535 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 SYNCRIPO60506 623 aaKnown RBP14.16□□□□□ -0.14
CHD3-209ENST00000473376 GJB3O75712 270 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 ZNF883P0CG24 379 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 WASP42768 502 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 ZBTB16Q05516 673 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 GEN1Q17RS7 908 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 ZNF423Q2M1K9 1284 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 FUT11Q495W5 492 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 CBWD6Q4V339 395 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 PKDCCQ504Y2 493 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 CBWD3Q5JTY5 395 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 CBWD5Q5RIA9 395 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 ADGRF1Q5T601 910 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 BHLHA9Q7RTU4 235 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 KIAA0907Q7Z7F0 614 aaPredicted RBP14.16□□□□□ -0.14
CHD3-209ENST00000473376 DENND1CQ8IV53 801 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 MINDY1Q8N5J2 469 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.16□□□□□ -0.14
CHD3-209ENST00000473376 SPRYD3Q8NCJ5 442 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 IRGQQ8WZA9 623 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 TATDN2Q93075 761 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 SLC35C1Q96A29 364 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 DHTKD1Q96HY7 919 aaPredicted RBP14.16□□□□□ -0.14
CHD3-209ENST00000473376 CEP63Q96MT8 703 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 IPO9Q96P70 1041 aaKnown RBP14.16□□□□□ -0.14
CHD3-209ENST00000473376 NUP58Q9BVL2 599 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 TMEM121BQ9BXQ6 578 aaPredicted RBP14.16□□□□□ -0.14
CHD3-209ENST00000473376 MMRN2Q9H8L6 949 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 PLK2Q9NYY3 685 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 TSPAN16Q9UKR8 245 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 CYP8B1Q9UNU6 501 aa14.16□□□□□ -0.14
CHD3-209ENST00000473376 MYH10P35580 1976 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 A0A1B0GTW7 788 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 SLC12A8A0AV02 714 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 METTL12A8MUP2 240 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 IRAK2O43187 625 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms