RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 APOL1O14791 398 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 ARF4P18085 180 aaPredicted RBP21.83■■□□□ 1.09
COL18A1-207ENST00000473212 PAPOLAP51003 745 aaKnown RBP21.83■■□□□ 1.09
COL18A1-207ENST00000473212 TTC30AQ86WT1 665 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 RTP4Q96DX8 246 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 IFT43Q96FT9 208 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 PGLYRP2Q96PD5 576 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 MAGEA13PA6NCF6 341 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 IRF6O14896 467 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 SNNO75324 88 aaPredicted RBP21.83■■□□□ 1.09
COL18A1-207ENST00000473212 CNMDO75829 334 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 BPGMP07738 259 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 VDRP11473 427 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 ADORA2AP29274 412 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 TRMT5Q32P41 509 aaKnown RBP21.83■■□□□ 1.09
COL18A1-207ENST00000473212 C11orf91Q3C1V1 193 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 C6orf163Q5TEZ5 329 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 FOXB2Q5VYV0 432 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 ACOT1Q86TX2 421 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 MAP7D3Q8IWC1 876 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 SLC25A41Q8N5S1 370 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 PPP1R13LQ8WUF5 828 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 TTC1Q99614 292 aa21.83■■□□□ 1.09
COL18A1-207ENST00000473212 A0A0G2JMZ2 1700 aa21.83■■□□□ 1.08
COL18A1-207ENST00000473212 LRRC37A2A6NM11 1700 aa21.83■■□□□ 1.08
COL18A1-207ENST00000473212 IL18RAPO95256 599 aa21.82■■□□□ 1.08
COL18A1-207ENST00000473212 UBTFL6P0CB48 400 aaPredicted RBP21.82■■□□□ 1.08
COL18A1-207ENST00000473212 MYLK4Q86YV6 388 aaPredicted RBP21.82■■□□□ 1.08
COL18A1-207ENST00000473212 GBA2Q9HCG7 927 aaPredicted RBP21.82■■□□□ 1.08
COL18A1-207ENST00000473212 MKS1Q9NXB0 559 aa21.82■■□□□ 1.08
COL18A1-207ENST00000473212 MEI4A8MW99 385 aa21.82■■□□□ 1.08
COL18A1-207ENST00000473212 C22orf31O95567 290 aa21.82■■□□□ 1.08
COL18A1-207ENST00000473212 BAG2O95816 211 aa21.82■■□□□ 1.08
COL18A1-207ENST00000473212 ACTR3P61158 418 aa21.82■■□□□ 1.08
COL18A1-207ENST00000473212 CBLBQ13191 982 aa21.82■■□□□ 1.08
COL18A1-207ENST00000473212 STX3Q13277 289 aa21.82■■□□□ 1.08
COL18A1-207ENST00000473212 C1orf146Q5VVC0 180 aa21.82■■□□□ 1.08
COL18A1-207ENST00000473212 MOB2Q70IA6 237 aa21.82■■□□□ 1.08
COL18A1-207ENST00000473212 STKLD1Q8NE28 680 aa21.82■■□□□ 1.08
COL18A1-207ENST00000473212 MRPL45Q9BRJ2 306 aaKnown RBP21.82■■□□□ 1.08
COL18A1-207ENST00000473212 BARX2Q9UMQ3 279 aaPredicted RBP21.82■■□□□ 1.08
COL18A1-207ENST00000473212 INSRRP14616 1297 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 NBPF20Q3BBV1 942 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 DNAL1Q4LDG9 190 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 OLFML1Q6UWY5 402 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 IZUMO2Q6UXV1 221 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 MTBPQ96DY7 904 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 OTUD5Q96G74 571 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 MMP19Q99542 508 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 DDX50Q9BQ39 737 aaKnown RBP21.81■■□□□ 1.08
COL18A1-207ENST00000473212 IL1RAPL1Q9NZN1 696 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 BCLAF3A2AJT9 711 aaKnown RBP21.81■■□□□ 1.08
COL18A1-207ENST00000473212 USP1O94782 785 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 F7P08709 466 aaPredicted RBP21.81■■□□□ 1.08
COL18A1-207ENST00000473212 TXNP10599 105 aaKnown RBP21.81■■□□□ 1.08
COL18A1-207ENST00000473212 TGM2P21980 687 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 CRHR1P34998 444 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 HDAC4P56524 1084 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 TMEM132DQ14C87 1099 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 NOL9Q5SY16 702 aaKnown RBP21.81■■□□□ 1.08
COL18A1-207ENST00000473212 C16orf46Q6P387 395 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 PLPPR4Q7Z2D5 763 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 ADGRF2Q8IZF7 708 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 GSDMBQ8TAX9 411 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 CLMNQ96JQ2 1002 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 SIGLEC10Q96LC7 697 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 CEP350Q5VT06 3117 aa21.81■■□□□ 1.08
COL18A1-207ENST00000473212 PAPSS1O43252 624 aaPredicted RBP21.8■■□□□ 1.08
COL18A1-207ENST00000473212 SERPINA6P08185 405 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 AP2B1P63010 937 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 PDK2Q15119 407 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 APBB2Q92870 758 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 APOL6Q9BWW8 343 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 CEP41Q9BYV8 373 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 NDE1Q9NXR1 346 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 PPM1HQ9ULR3 514 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 AKT3Q9Y243 479 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 FAM159BA6NKW6 160 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 GSTA2P09210 222 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 MAGEA6P43360 314 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 LCLAT1Q6UWP7 414 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 CCNJLQ8IV13 435 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 PPP1R14CQ8TAE6 165 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 DEPDC1BQ8WUY9 529 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 EBNA1BP2Q99848 306 aaKnown RBP21.8■■□□□ 1.08
COL18A1-207ENST00000473212 ELP3Q9H9T3 547 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 XAB2Q9HCS7 855 aaKnown RBP21.8■■□□□ 1.08
COL18A1-207ENST00000473212 DPP3Q9NY33 737 aa21.8■■□□□ 1.08
COL18A1-207ENST00000473212 GAS2O43903 313 aaKnown RBP21.79■■□□□ 1.08
COL18A1-207ENST00000473212 LYPLA1O75608 230 aaPredicted RBP21.79■■□□□ 1.08
COL18A1-207ENST00000473212 C6orf222P0C671 652 aaPredicted RBP21.79■■□□□ 1.08
COL18A1-207ENST00000473212 WASHC5Q12768 1159 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 RAB3IL1Q8TBN0 382 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 LRRC39Q96DD0 335 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 THAP1Q9NVV9 213 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 E2F8A0AVK6 867 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 SDR42E2A6NKP2 422 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 BIRC5O15392 142 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 ZCCHC18P0CG32 403 aa21.79■■□□□ 1.08
COL18A1-207ENST00000473212 CYP2F1P24903 491 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms