RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 WBP2Q969T9 261 aa15.74■□□□□ 0.11
SNX13-205ENST00000471744 DDX50Q9BQ39 737 aaKnown RBP15.74■□□□□ 0.11
SNX13-205ENST00000471744 IRX2Q9BZI1 471 aaPredicted RBP15.74■□□□□ 0.11
SNX13-205ENST00000471744 FAM204AQ9H8W3 233 aa15.74■□□□□ 0.11
SNX13-205ENST00000471744 C11orf16Q9NQ32 467 aa15.74■□□□□ 0.11
SNX13-205ENST00000471744 SPHK2Q9NRA0 654 aa15.74■□□□□ 0.11
SNX13-205ENST00000471744 PAXBP1Q9Y5B6 917 aa15.74■□□□□ 0.11
SNX13-205ENST00000471744 ZNF318Q5VUA4 2279 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 AKR1B15C9JRZ8 316 aaPredicted RBP15.73■□□□□ 0.11
SNX13-205ENST00000471744 DDX3XO00571 662 aaKnown RBP eCLIP15.73■□□□□ 0.113e-18■■■□□ 15.2
SNX13-205ENST00000471744 RTN2O75298 545 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 APOEP02649 317 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 KLKB1P03952 638 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 ADH5P11766 374 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 GJA4P35212 333 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 EIF2DP41214 584 aaKnown RBP15.73■□□□□ 0.11
SNX13-205ENST00000471744 MAGEA9P43362 315 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 SLC11A2P49281 568 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 RNASE9P60153 205 aaKnown RBP15.73■□□□□ 0.11
SNX13-205ENST00000471744 TBX2Q13207 712 aaPredicted RBP15.73■□□□□ 0.11
SNX13-205ENST00000471744 PREPLQ4J6C6 727 aaPredicted RBP15.73■□□□□ 0.11
SNX13-205ENST00000471744 C2CD6Q53TS8 623 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 IER5LQ5T953 404 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 ASTLQ6HA08 431 aaPredicted RBP15.73■□□□□ 0.11
SNX13-205ENST00000471744 RHBDF2Q6PJF5 856 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 DENND1CQ8IV53 801 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 OLIG1Q8TAK6 271 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 PGAP3Q96FM1 320 aaPredicted RBP15.73■□□□□ 0.11
SNX13-205ENST00000471744 SLC39A13Q96H72 371 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.73■□□□□ 0.11
SNX13-205ENST00000471744 SELENOOQ9BVL4 669 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 LTB4R2Q9NPC1 389 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 ABHD10Q9NUJ1 306 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.73■□□□□ 0.11
SNX13-205ENST00000471744 DDIT4Q9NX09 232 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 SLC12A6Q9UHW9 1150 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 STOML2Q9UJZ1 356 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 TMEM59LQ9UK28 342 aa15.73■□□□□ 0.11
SNX13-205ENST00000471744 AGO1Q9UL18 857 aaKnown RBP15.73■□□□□ 0.11
SNX13-205ENST00000471744 SSU72P8A0A1W2PR75 194 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 ANKRD62A6NC57 917 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 FAM86C2PA6NEL3 165 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 OTOL1A6NHN0 477 aaPredicted RBP15.72■□□□□ 0.11
SNX13-205ENST00000471744 SIGLEC16A6NMB1 481 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 TRDMT1O14717 391 aaKnown RBP15.72■□□□□ 0.11
SNX13-205ENST00000471744 SCAMP3O14828 347 aaKnown RBP15.72■□□□□ 0.11
SNX13-205ENST00000471744 HOXC11O43248 304 aaPredicted RBP15.72■□□□□ 0.11
SNX13-205ENST00000471744 CYBBP04839 570 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 MYBL1P10243 752 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 KRT3P12035 628 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 DESP17661 470 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 AOC1P19801 751 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 CCR1P32246 355 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 SOX9P48436 509 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 EIF4EBP2Q13542 120 aaPredicted RBP15.72■□□□□ 0.11
SNX13-205ENST00000471744 UBXN2BQ14CS0 331 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 SLC25A52Q3SY17 297 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 LY6G5CQ5SRR4 150 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 ADGRF1Q5T601 910 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 DNAJC24Q6P3W2 148 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 SND1Q7KZF4 910 aaKnown RBP eCLIP15.72■□□□□ 0.11
SNX13-205ENST00000471744 FAM217AQ8IXS0 508 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 ATP6V0D2Q8N8Y2 350 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 PJA1Q8NG27 643 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 TTC8Q8TAM2 541 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 ADAM32Q8TC27 787 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 NT5C3BQ969T7 300 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 FCRL2Q96LA5 508 aaPredicted RBP15.72■□□□□ 0.11
SNX13-205ENST00000471744 NPY6RQ99463 290 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 METTL5Q9NRN9 209 aaKnown RBP15.72■□□□□ 0.11
SNX13-205ENST00000471744 MARK1Q9P0L2 795 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 ADAMTS1Q9UHI8 967 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 SIT1Q9Y3P8 196 aa15.72■□□□□ 0.11
SNX13-205ENST00000471744 KIAA1549LQ6ZVL6 1849 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 MYO18AQ92614 2054 aaKnown RBP15.71■□□□□ 0.11
SNX13-205ENST00000471744 COL4A3Q01955 1670 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 TMCO5BA8MYB1 307 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.71■□□□□ 0.11
SNX13-205ENST00000471744 M0QYT0 321 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 PDGFBP01127 241 aaPredicted RBP15.71■□□□□ 0.11
SNX13-205ENST00000471744 FTLP02792 175 aaPredicted RBP15.71■□□□□ 0.11
SNX13-205ENST00000471744 ABCB4P21439 1286 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 SDC4P31431 198 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 FLT3P36888 993 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 SULT1E1P49888 294 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 GRSF1Q12849 480 aaKnown RBP eCLIP15.71■□□□□ 0.11
SNX13-205ENST00000471744 LRRC32Q14392 662 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 PPP2R5DQ14738 602 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 ANO4Q32M45 955 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 CWF19L1Q69YN2 538 aaKnown RBP15.71■□□□□ 0.11
SNX13-205ENST00000471744 CCDC26Q8TAB7 109 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 CD101Q93033 1021 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 RNF34Q969K3 372 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 BTN2A3PQ96KV6 586 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 XPO6Q96QU8 1125 aaKnown RBP15.71■□□□□ 0.11
SNX13-205ENST00000471744 P2RY13Q9BPV8 354 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 LRFN3Q9BTN0 628 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 ISCUQ9H1K1 167 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 DEF6Q9H4E7 631 aa15.71■□□□□ 0.11
SNX13-205ENST00000471744 PARVAQ9NVD7 372 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms