RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.49□□□□□ -1.37
CCDC39-202ENST00000471307 PPM1GO15355 546 aaPredicted RBP6.49□□□□□ -1.37
CCDC39-202ENST00000471307 CA12O43570 354 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 PRAMEF2O60811 474 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 COQ9O75208 318 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 USP12O75317 370 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 TMEM191BP0C7N4 346 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 CASP5P51878 434 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 GPS1Q13098 491 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 KCNJ12Q14500 433 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 HLTFQ14527 1009 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCDC39-202ENST00000471307 FAM110CQ1W6H9 321 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 AASDHQ4L235 1098 aaPredicted RBP6.49□□□□□ -1.37
CCDC39-202ENST00000471307 FAXCQ5TGI0 409 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 MRNIPQ6NTE8 343 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 P3H2Q8IVL5 708 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 RNF152Q8N8N0 203 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 P2RY11Q96G91 374 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 EIF2AQ9BY44 585 aaKnown RBP6.49□□□□□ -1.37
CCDC39-202ENST00000471307 MAGEB5Q9BZ81 275 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 VPS45Q9NRW7 570 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 MYO1AQ9UBC5 1043 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 LRRIQ1Q96JM4 1722 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 KDM5BQ9UGL1 1544 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 CFAP43Q8NDM7 1665 aa6.49□□□□□ -1.37
CCDC39-202ENST00000471307 ZMYM2Q9UBW7 1377 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 POM121BA6NF01 834 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 KCNAB3O43448 404 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 TLR2O60603 784 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 IDEP14735 1019 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 TSHRP16473 764 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 FGFR2P21802 821 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 WDR5P61964 334 aaKnown RBP6.48□□□□□ -1.37
CCDC39-202ENST00000471307 IFIT5Q13325 482 aaKnown RBP6.48□□□□□ -1.37
CCDC39-202ENST00000471307 FHL3Q13643 280 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 RBMS2Q15434 407 aaKnown RBP6.48□□□□□ -1.37
CCDC39-202ENST00000471307 ABLIM2Q6H8Q1 611 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 TLDC1Q6P9B6 456 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 CCDC150Q8NCX0 1101 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 ZBTB9Q96C00 473 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 C8orf48Q96LL4 319 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 SARGQ9BW04 601 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 NUAK2Q9H093 628 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 MTMR4Q9NYA4 1195 aa6.48□□□□□ -1.37
CCDC39-202ENST00000471307 CDK13Q14004 1512 aaKnown RBP6.48□□□□□ -1.37
CCDC39-202ENST00000471307 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.47□□□□□ -1.37
CCDC39-202ENST00000471307 A0A1W2PPC4 97 aa6.47□□□□□ -1.37
CCDC39-202ENST00000471307 KIF3BO15066 747 aa6.47□□□□□ -1.37
CCDC39-202ENST00000471307 CBFA2T3O75081 653 aa6.47□□□□□ -1.37
CCDC39-202ENST00000471307 MBPP02686 304 aaPredicted RBP6.47□□□□□ -1.37
CCDC39-202ENST00000471307 ARP10275 920 aa6.47□□□□□ -1.37
CCDC39-202ENST00000471307 CTSAP10619 480 aa6.47□□□□□ -1.37
CCDC39-202ENST00000471307 HOXD9P28356 352 aaPredicted RBP6.47□□□□□ -1.37
CCDC39-202ENST00000471307 DUSP1P28562 367 aa6.47□□□□□ -1.37
CCDC39-202ENST00000471307 GALNSP34059 522 aa6.47□□□□□ -1.37
CCDC39-202ENST00000471307 ZNF91Q05481 1191 aa6.47□□□□□ -1.37
CCDC39-202ENST00000471307 SLC9C1Q4G0N8 1177 aa6.47□□□□□ -1.37
CCDC39-202ENST00000471307 RRAGBQ5VZM2 374 aa6.47□□□□□ -1.37
CCDC39-202ENST00000471307 BCAS4Q8TDM0 211 aa6.47□□□□□ -1.37
CCDC39-202ENST00000471307 ADCY10Q96PN6 1610 aa6.47□□□□□ -1.37
CCDC39-202ENST00000471307 LY6G6EA0A0G2JKS1 128 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 KPNA5O15131 536 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 CD63P08962 238 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 MATN1P21941 496 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 MST1P26927 711 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 TROQ12816 1431 aaPredicted RBP6.46□□□□□ -1.38
CCDC39-202ENST00000471307 SAFBQ15424 915 aaKnown RBP eCLIP6.46□□□□□ -1.38
CCDC39-202ENST00000471307 AWAT2Q6E213 333 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 CRTC1Q6UUV9 634 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 C11orf96Q7Z7L8 435 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 ANKRD13BQ86YJ7 626 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 CCDC33Q8N5R6 958 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 LRRC46Q96FV0 321 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 SNX27Q96L92 541 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 SAP30LQ9HAJ7 183 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 ARL8BQ9NVJ2 186 aa6.46□□□□□ -1.38
CCDC39-202ENST00000471307 SIRT4Q9Y6E7 314 aaPredicted RBP6.46□□□□□ -1.38
CCDC39-202ENST00000471307 EHBP1L1Q8N3D4 1523 aa6.45□□□□□ -1.38
CCDC39-202ENST00000471307 OR2W5A6NFC9 320 aa6.45□□□□□ -1.38
CCDC39-202ENST00000471307 ADAM10O14672 748 aa6.45□□□□□ -1.38
CCDC39-202ENST00000471307 INPPL1O15357 1258 aa6.45□□□□□ -1.38
CCDC39-202ENST00000471307 SLC5A1P13866 664 aa6.45□□□□□ -1.38
CCDC39-202ENST00000471307 PRF1P14222 555 aa6.45□□□□□ -1.38
CCDC39-202ENST00000471307 MMP8P22894 467 aa6.45□□□□□ -1.38
CCDC39-202ENST00000471307 KPNB1Q14974 876 aaKnown RBP6.45□□□□□ -1.38
CCDC39-202ENST00000471307 KIAA0408Q6ZU52 694 aa6.45□□□□□ -1.38
CCDC39-202ENST00000471307 CLASRPQ8N2M8 674 aaKnown RBP6.45□□□□□ -1.38
CCDC39-202ENST00000471307 MPLKIPQ8TAP9 179 aa6.45□□□□□ -1.38
CCDC39-202ENST00000471307 OVCA2Q8WZ82 227 aa6.45□□□□□ -1.38
CCDC39-202ENST00000471307 STARD7Q9NQZ5 370 aa6.45□□□□□ -1.38
CCDC39-202ENST00000471307 ZCCHC11Q5TAX3 1644 aaKnown RBP6.45□□□□□ -1.38
CCDC39-202ENST00000471307 MAGI3Q5TCQ9 1506 aa6.45□□□□□ -1.38
CCDC39-202ENST00000471307 SUPT6HQ7KZ85 1726 aaKnown RBP6.45□□□□□ -1.38
CCDC39-202ENST00000471307 MYMKA6NI61 221 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 TTC34A8MYJ7 566 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 PARNO95453 639 aaKnown RBP6.44□□□□□ -1.38
CCDC39-202ENST00000471307 TRIM27P14373 513 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 PBX1P40424 430 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 STT3AP46977 705 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 PRIM2P49643 509 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms