RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 RNF38Q9H0F5 515 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 TMEM134Q9H6X4 195 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 TM9SF3Q9HD45 589 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 ITM2CQ9NQX7 267 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 ARHGAP28Q9P2N2 729 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 FBXO2Q9UK22 296 aaPredicted RBP6.23□□□□□ -1.41
VARS-222ENST00000470953 PCDHGA4Q9Y5G9 962 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 TP53BP1Q12888 1972 aaPredicted RBP6.23□□□□□ -1.41
VARS-222ENST00000470953 ACANP16112 2415 aa6.23□□□□□ -1.41
VARS-222ENST00000470953 ESPL1Q14674 2120 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 KIF26BQ2KJY2 2108 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 SCN1AP35498 2009 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 A0A1B0GTQ1 180 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 CDRT15L2A8MXV6 281 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 PRRT4C9JH25 899 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 CLDN3O15551 220 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 XPOTO43592 962 aaKnown RBP6.22□□□□□ -1.41
VARS-222ENST00000470953 TULP3O75386 442 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 CSO75390 466 aaKnown RBP6.22□□□□□ -1.41
VARS-222ENST00000470953 PRPF40AO75400 957 aaKnown RBP6.22□□□□□ -1.41
VARS-222ENST00000470953 TOM1L1O75674 476 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 NOL4O94818 638 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 CLSTN1O94985 981 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 GCNT3O95395 438 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 YEATS4O95619 227 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 F13A1P00488 732 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 CSH1P0DML2 217 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 CSH2P0DML3 217 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 ZSCAN22P10073 491 aaPredicted RBP6.22□□□□□ -1.41
VARS-222ENST00000470953 MAPTP10636 758 aaKnown RBP6.22□□□□□ -1.41
VARS-222ENST00000470953 MCF2P10911 925 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 SCP2P22307 547 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 PROZP22891 400 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 CYP2F1P24903 491 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 RBMS1P29558 406 aaKnown RBP6.22□□□□□ -1.41
VARS-222ENST00000470953 TPMTP51580 245 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 POLE2P56282 527 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 LILRA4P59901 499 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 ASIC1P78348 528 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 GRIN1Q05586 938 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 MAPK7Q13164 816 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 MORC3Q14149 939 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 KCNB1Q14721 858 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 ZBTB6Q15916 424 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 FUT11Q495W5 492 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 CDCP2Q5VXM1 449 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 STXBP4Q6ZWJ1 553 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 DYMQ7RTS9 669 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 TRMT11Q7Z4G4 463 aaKnown RBP6.22□□□□□ -1.41
VARS-222ENST00000470953 FAM124AQ86V42 546 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 HEATR4Q86WZ0 1026 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 PRIMA1Q86XR5 153 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 SYCP3Q8IZU3 236 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 DAW1Q8N136 415 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 PDILTQ8N807 584 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 TERB1Q8NA31 727 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 GALNT11Q8NCW6 608 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 KCNV2Q8TDN2 545 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 FAM212AQ96EL1 285 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 EPSTI1Q96J88 318 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 MYRFLQ96LU7 910 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 CLIC6Q96NY7 704 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 ORAI3Q9BRQ5 295 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 MSTO1Q9BUK6 570 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 CCSER1Q9C0I3 900 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 LRRC27Q9C0I9 530 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 C6orf106Q9H6K1 298 aaPredicted RBP6.22□□□□□ -1.41
VARS-222ENST00000470953 MRPL44Q9H9J2 332 aaKnown RBP6.22□□□□□ -1.41
VARS-222ENST00000470953 SMPD4Q9NXE4 827 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 FAM13BQ9NYF5 915 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 ERRFI1Q9UJM3 462 aaPredicted RBP6.22□□□□□ -1.41
VARS-222ENST00000470953 CFAP45Q9UL16 551 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 EXOC7Q9UPT5 735 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 ATP6V1DQ9Y5K8 247 aa6.22□□□□□ -1.41
VARS-222ENST00000470953 SRPRBQ9Y5M8 271 aaKnown RBP6.22□□□□□ -1.41
VARS-222ENST00000470953 TMEM200CA6NKL6 621 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 NOBOXO60393 691 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 CUTAO60888 179 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 CYP11A1P05108 521 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 NFICP08651 508 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 CXCL8P10145 99 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 RARGP13631 454 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 GAP43P17677 238 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 NASPP49321 788 aaPredicted RBP6.21□□□□□ -1.42
VARS-222ENST00000470953 NCKAP1LP55160 1127 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 USP46P62068 366 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 KRT85P78386 507 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 AMPD3Q01432 767 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 BNIP3Q12983 259 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 SLC39A14Q15043 492 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 KYAT1Q16773 422 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 WSCD1Q658N2 575 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 ZPBP2Q6X784 338 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 METTL3Q86U44 580 aaKnown RBP6.21□□□□□ -1.42
VARS-222ENST00000470953 SFR1Q86XK3 245 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 CACUL1Q86Y37 369 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 TMEM25Q86YD3 366 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 CCDC65Q8IXS2 484 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 TMEM161BQ8NDZ6 487 aa6.21□□□□□ -1.42
VARS-222ENST00000470953 SPPL2BQ8TCT7 592 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms