RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 ABCB4P21439 1286 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 GPD1P21695 349 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 HADHBP55084 474 aaKnown RBP13.15□□□□□ -0.3
SND1-209ENST00000470723 MLLT6P55198 1093 aaPredicted RBP13.15□□□□□ -0.3
SND1-209ENST00000470723 TBX4P57082 545 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 KRT83P78385 493 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 CCZ1BP86790 482 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 CCZ1P86791 482 aaPredicted RBP13.15□□□□□ -0.3
SND1-209ENST00000470723 OGDHQ02218 1023 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 TDGQ13569 410 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 ARHGAP29Q52LW3 1261 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 DCUN1D2Q6PH85 259 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 ZNF662Q6ZS27 426 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 TAC4Q86UU9 113 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 MIB1Q86YT6 1006 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 UNC45BQ8IWX7 931 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 FAM217AQ8IXS0 508 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 GJD3Q8N144 294 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 EMC1Q8N766 993 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 OSCP1Q8WVF1 389 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 RSAD2Q8WXG1 361 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 CTNNBL1Q8WYA6 563 aaPredicted RBP13.15□□□□□ -0.3
SND1-209ENST00000470723 WBP2Q969T9 261 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 OTUB2Q96DC9 234 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 ARHGEF26Q96DR7 871 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 FCRL2Q96LA5 508 aaPredicted RBP13.15□□□□□ -0.3
SND1-209ENST00000470723 TRMT61BQ9BVS5 477 aaKnown RBP13.15□□□□□ -0.3
SND1-209ENST00000470723 IRX2Q9BZI1 471 aaPredicted RBP13.15□□□□□ -0.3
SND1-209ENST00000470723 CD320Q9NPF0 282 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
SND1-209ENST00000470723 THG1LQ9NWX6 298 aaKnown RBP13.15□□□□□ -0.3
SND1-209ENST00000470723 CFAP97Q9P2B7 532 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 TBC1D14Q9P2M4 693 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 LCMT1Q9UIC8 334 aa13.15□□□□□ -0.3
SND1-209ENST00000470723 A0A0A6YYK5 440 aaPredicted RBP13.14□□□□□ -0.31
SND1-209ENST00000470723 FAM170AA1A519 330 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 M0QYT0 321 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 ARNTLO00327 626 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 GFRA2O00451 464 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 TFE3P19532 575 aaPredicted RBP13.14□□□□□ -0.31
SND1-209ENST00000470723 SDC4P31431 198 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 CCDC173Q0VFZ6 552 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 ACBD5Q5T8D3 534 aaPredicted RBP13.14□□□□□ -0.31
SND1-209ENST00000470723 NUGGCQ68CJ6 796 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 ALYREFQ86V81 257 aaKnown RBP13.14□□□□□ -0.31
SND1-209ENST00000470723 RNF135Q8IUD6 432 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 RHOT2Q8IXI1 618 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 NIPA2Q8N8Q9 360 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 SLC35G2Q8TBE7 412 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 CALR3Q96L12 384 aaKnown RBP13.14□□□□□ -0.31
SND1-209ENST00000470723 C1orf74Q96LT6 269 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 CFAP57Q96MR6 1250 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 MCEEQ96PE7 176 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 TBCBQ99426 244 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 NCAPGQ9BPX3 1015 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 KXD1Q9BQD3 176 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 NUP85Q9BW27 656 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 LINC00597Q9H2U6 94 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 SLC2A4RGQ9NR83 387 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 PIGVQ9NUD9 493 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 DDIT4Q9NX09 232 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 SMPD4Q9NXE4 827 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 ARHGEF38Q9NXL2 777 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 RASAL2Q9UJF2 1139 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 ADGRG1Q9Y653 693 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 BDP1A6H8Y1 2624 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 TTC28Q96AY4 2481 aa13.14□□□□□ -0.31
SND1-209ENST00000470723 KIF26AQ9ULI4 1882 aaPredicted RBP13.13□□□□□ -0.31
SND1-209ENST00000470723 RCCD1A6NED2 376 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 MYO1FO00160 1098 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 ATMINO43313 823 aaPredicted RBP13.13□□□□□ -0.31
SND1-209ENST00000470723 IPO7O95373 1038 aaKnown RBP13.13□□□□□ -0.31
SND1-209ENST00000470723 SP100P23497 879 aaPredicted RBP13.13□□□□□ -0.31
SND1-209ENST00000470723 CCR1P32246 355 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 ARHGAP25P42331 645 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 HARS2P49590 506 aaKnown RBP13.13□□□□□ -0.31
SND1-209ENST00000470723 HDAC4P56524 1084 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 ZNF252P-AS1Q0IIN9 211 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 PIGHQ14442 188 aaPredicted RBP13.13□□□□□ -0.31
SND1-209ENST00000470723 PDGFRLQ15198 375 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 EML3Q32P44 896 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 ZC3H12AQ5D1E8 599 aaKnown RBP13.13□□□□□ -0.31
SND1-209ENST00000470723 BRMS1LQ5PSV4 323 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 ADGRF1Q5T601 910 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 SH3PXD2AQ5TCZ1 1133 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 CPXM2Q8N436 756 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 ARFGAP1Q8N6T3 406 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 ADAM32Q8TC27 787 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 IRF7Q92985 503 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 MYO1AQ9UBC5 1043 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 IP6K2Q9UHH9 426 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 AGO1Q9UL18 857 aaKnown RBP13.13□□□□□ -0.31
SND1-209ENST00000470723 SH3BP1Q9Y3L3 701 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 PAXBP1Q9Y5B6 917 aa13.13□□□□□ -0.31
SND1-209ENST00000470723 F5P12259 2224 aa13.12□□□□□ -0.31
SND1-209ENST00000470723 MSI1O43347 362 aaKnown RBP13.12□□□□□ -0.31
SND1-209ENST00000470723 ASGR2P07307 311 aa13.12□□□□□ -0.31
SND1-209ENST00000470723 RDXP35241 583 aaKnown RBP13.12□□□□□ -0.31
SND1-209ENST00000470723 ADRA1BP35368 520 aa13.12□□□□□ -0.31
SND1-209ENST00000470723 PCK1P35558 622 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms